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Protein
Submitted name:

U3 small nucleolar RNA-associated protein 18 homolog

Gene

UTP18

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
U3 small nucleolar RNA-associated protein 18 homologImported
Gene namesi
Name:UTP18Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

EuPathDBiHostDB:ENSG00000011260.13
HGNCiHGNC:24274 UTP18

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000011260

PTM / Processingi

Proteomic databases

EPDiJ3KSR7
MaxQBiJ3KSR7
PeptideAtlasiJ3KSR7
PRIDEiJ3KSR7

Expressioni

Gene expression databases

BgeeiENSG00000011260 Expressed in 231 organ(s), highest expression level in testis
ExpressionAtlasiJ3KSR7 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliJ3KSR7
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini88 – 129WD_REPEATS_REGIONInterPro annotationAdd BLAST42
Repeati95 – 129WDPROSITE-ProRule annotationAdd BLAST35

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG2055 Eukaryota
ENOG410YBWP LUCA
GeneTreeiENSGT00440000033919

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 1 hit
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

J3KSR7-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
IYLERFPIFK ACFSANGEEV LATSTHSKVL YVYDMLAGKL IPVHQVRGLK
60 70 80 90 100
EKIVRSFEVS PDGSFLLING IAGYLHLLAM KTKELIGSMK INGRVAASTF
110 120 130 140 150
SSDSKKVYAS SGDGEVYVWD VNSRKCLNRF VDEGSLYGLS IATSRNGQYV
160 170
ACGLKLGKLL VYISLPPFAN WSLGGKF
Length:177
Mass (Da):19,428
Last modified:October 3, 2012 - v1
Checksum:i642A6A548D116233
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9Y5J1UTP18_HUMAN
U3 small nucleolar RNA-associated p...
UTP18 WDR50, CDABP0061, CGI-48
556Annotation score:
J3QR85J3QR85_HUMAN
U3 small nucleolar RNA-associated p...
UTP18
143Annotation score:
J3QRG0J3QRG0_HUMAN
U3 small nucleolar RNA-associated p...
UTP18
123Annotation score:
F6VJE8F6VJE8_HUMAN
U3 small nucleolar RNA-associated p...
UTP18
43Annotation score:
J3QLD6J3QLD6_HUMAN
U3 small nucleolar RNA-associated p...
UTP18
115Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006141 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000583725; ENSP00000462614; ENSG00000011260
UCSCiuc060hpa.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006141 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliJ3KSR7
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

EPDiJ3KSR7
MaxQBiJ3KSR7
PeptideAtlasiJ3KSR7
PRIDEiJ3KSR7

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000583725; ENSP00000462614; ENSG00000011260
UCSCiuc060hpa.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000011260.13
HGNCiHGNC:24274 UTP18
OpenTargetsiENSG00000011260
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2055 Eukaryota
ENOG410YBWP LUCA
GeneTreeiENSGT00440000033919

Miscellaneous databases

ChiTaRSiUTP18 human

Gene expression databases

BgeeiENSG00000011260 Expressed in 231 organ(s), highest expression level in testis
ExpressionAtlasiJ3KSR7 baseline and differential

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 1 hit
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 1 hit
PS50294 WD_REPEATS_REGION, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiJ3KSR7_HUMAN
AccessioniPrimary (citable) accession number: J3KSR7
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: September 12, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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