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Protein
Submitted name:

Nucleosome-remodeling factor subunit BPTF

Gene

BPTF

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Nucleosome-remodeling factor subunit BPTFImported
Gene namesi
Name:BPTFImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 17

Organism-specific databases

EuPathDBiHostDB:ENSG00000171634.16
HGNCiHGNC:3581 BPTF

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000171634

PTM / Processingi

Proteomic databases

MaxQBiJ3KSK9
PeptideAtlasiJ3KSK9
PRIDEiJ3KSK9

Expressioni

Gene expression databases

BgeeiENSG00000171634 Expressed in 223 organ(s), highest expression level in kidney
ExpressionAtlasiJ3KSK9 baseline and differential

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliJ3KSK9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili312 – 332Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG1473 Eukaryota
KOG1632 Eukaryota
COG5076 LUCA
GeneTreeiENSGT00930000150850

Family and domain databases

InterProiView protein in InterPro
IPR038028 BPTF
PANTHERiPTHR22880:SF137 PTHR22880:SF137, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 11 potential isoforms that are computationally mapped.Show allAlign All

J3KSK9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XNIQSSASQP PRPQQGQVKL TMAQLTQLTQ GHGGNQGLTV VIQGQGQTTG
60 70 80 90 100
QLQLIPQGVT VLPGPGQQLM QAAMPNGTVQ RFLFTPLATT ATTASTTTTT
110 120 130 140 150
VSTTAAGTGE QRQSKLSPQM QVHQDKTLPP AQSSSVGPAE AQPQTAQPSA
160 170 180 190 200
QPQPQTQPQS PAQPEVQTQP EVQTQTTVSS HVPSEAQPTH AQSSKPQVAA
210 220 230 240 250
QSQPQSNVQG QSPVRVQSPS QTRIRPSTPS QLSPGQQSQV QTTTSQPIPI
260 270 280 290 300
QPHTSLQIPS QGQPQSQPQV VMKHNAVIEH LKQKKSMTPA EREENQRMIV
310 320 330 340 350
CNQVMKYILD KIDKEEKQAA KKRKREESVE QKRSKQNATK LSALLFKHKE
360 370 380 390 400
QLRAEILKKR ALLDKDLQIE VQEELKRDLK IKKEKDLMQL AQATAVAAPC
410 420 430 440 450
PPVTPAPPAP PAPPPSPPPP PAVQHTGLLS TPTLPAASQK RKREEEKDSS
460 470 480
SKSKKKKMIS TTSKETKKDT KLYCICKTPY DESK
Length:484
Mass (Da):52,592
Last modified:October 3, 2012 - v1
Checksum:i91C5F0E6A929CC65
GO

Computationally mapped potential isoform sequencesi

There are 11 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q12830BPTF_HUMAN
Nucleosome-remodeling factor subuni...
BPTF FAC1, FALZ
3,046Annotation score:
F5GXF5F5GXF5_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
2,457Annotation score:
E7ETD6E7ETD6_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
2,764Annotation score:
A0A0A0MR81A0A0A0MR81_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
810Annotation score:
J3QQK4J3QQK4_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
339Annotation score:
E9PE19E9PE19_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
2,822Annotation score:
J3QQQ8J3QQQ8_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
420Annotation score:
A0A2R8Y7Q1A0A2R8Y7Q1_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
2,965Annotation score:
J3QLW4J3QLW4_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
69Annotation score:
J3KSY0J3KSY0_HUMAN
Nucleosome-remodeling factor subuni...
BPTF
64Annotation score:
There is more potential isoformShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006534 Genomic DNA No translation available.
AC107377 Genomic DNA No translation available.
AC134407 Genomic DNA No translation available.
KC877674 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000580465; ENSP00000462535; ENSG00000171634
UCSCiuc060jcj.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006534 Genomic DNA No translation available.
AC107377 Genomic DNA No translation available.
AC134407 Genomic DNA No translation available.
KC877674 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliJ3KSK9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiJ3KSK9
PeptideAtlasiJ3KSK9
PRIDEiJ3KSK9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000580465; ENSP00000462535; ENSG00000171634
UCSCiuc060jcj.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000171634.16
HGNCiHGNC:3581 BPTF
OpenTargetsiENSG00000171634
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1473 Eukaryota
KOG1632 Eukaryota
COG5076 LUCA
GeneTreeiENSGT00930000150850

Miscellaneous databases

ChiTaRSiBPTF human

Gene expression databases

BgeeiENSG00000171634 Expressed in 223 organ(s), highest expression level in kidney
ExpressionAtlasiJ3KSK9 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR038028 BPTF
PANTHERiPTHR22880:SF137 PTHR22880:SF137, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiJ3KSK9_HUMAN
AccessioniPrimary (citable) accession number: J3KSK9
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: November 7, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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