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Protein
Submitted name:

Musashi homolog 2

Gene

MSI2

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Musashi homolog 2Imported
Gene namesi
Name:MSI2Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 12

Structurei

3D structure databases

ProteinModelPortaliI7H541
SMRiI7H541
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini21 – 111RRMInterPro annotationAdd BLAST91
Domaini110 – 187RRMInterPro annotationAdd BLAST78

Phylogenomic databases

GeneTreeiENSGT00900000140835
KOiK14411

Family and domain databases

CDDicd12576 RRM1_MSI, 1 hit
cd12323 RRM2_MSI, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR034130 MSI_RRM1
IPR034126 MSI_RRM2
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

I7H541-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEANGSQGTS GSANDSQHDP GKMFIGGLSW QTSPDSLRDY FSKFGEIREC
60 70 80 90 100
MVMRDPTTKR SRGFGFVTFA DPASVDKVLG QPHHELDSKT IDPKVAFPRR
110 120 130 140 150
AQPKMVTRTK KIFVGGLSAN TVVEDVKQYF EQFGKVEDAM LMFDKTTNRH
160 170 180 190 200
RGFGFVTFEN EDVVEKVCEI HFHEINNKMV ECKKAQPKEV MFPPGTRGRA
210 220 230 240 250
RGLPYTMDAF MLGMGMLGYP NFVATYGRGY PGFAPSYGYQ FPGFPAAAYG
260 270 280 290 300
PVAAAAVAAA RGSGSNPARP GGFPGANSPG PVADLYGPAS QDSGVGNYIS
310 320
AASPQPGSGF GHGIAGPLIA TAFTNGYH
Length:328
Mass (Da):35,197
Last modified:October 3, 2012 - v1
Checksum:i6E2FC929491748A2
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287ATA8A0A287ATA8_PIG
Uncharacterized protein
MSI2
354Annotation score:
K7GRF9K7GRF9_PIG
Uncharacterized protein
MSI2
307Annotation score:
A0A286ZLC8A0A286ZLC8_PIG
Uncharacterized protein
MSI2
328Annotation score:
A0A287B4R1A0A287B4R1_PIG
Uncharacterized protein
MSI2
315Annotation score:
A0A287AG72A0A287AG72_PIG
Uncharacterized protein
MSI2
342Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000080 Genomic DNA No translation available.
AB731109 mRNA Translation: BAM24698.2
RefSeqiNP_001302709.1, NM_001315780.1
UniGeneiSsc.45089

Genome annotation databases

EnsembliENSSSCT00000064756; ENSSSCP00000041954; ENSSSCG00000038505
GeneIDi100737226
KEGGissc:100737226

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000080 Genomic DNA No translation available.
AB731109 mRNA Translation: BAM24698.2
RefSeqiNP_001302709.1, NM_001315780.1
UniGeneiSsc.45089

3D structure databases

ProteinModelPortaliI7H541
SMRiI7H541
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000064756; ENSSSCP00000041954; ENSSSCG00000038505
GeneIDi100737226
KEGGissc:100737226

Organism-specific databases

CTDi124540

Phylogenomic databases

GeneTreeiENSGT00900000140835
KOiK14411

Family and domain databases

CDDicd12576 RRM1_MSI, 1 hit
cd12323 RRM2_MSI, 1 hit
Gene3Di3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR034130 MSI_RRM1
IPR034126 MSI_RRM2
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 2 hits
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 2 hits
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiI7H541_PIG
AccessioniPrimary (citable) accession number: I7H541
Entry historyiIntegrated into UniProtKB/TrEMBL: October 3, 2012
Last sequence update: October 3, 2012
Last modified: November 7, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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