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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

Aeqsu_1156

Organism
Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionLigaseImported

Enzyme and pathway databases

BioCyciASUB746697:G1H5O-1152-MONOMER

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
Ordered Locus Names:Aeqsu_1156Imported
OrganismiAequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3)Imported
Taxonomic identifieri746697 [NCBI]
Taxonomic lineageiBacteriaBacteroidetesFlavobacteriiaFlavobacterialesFlavobacteriaceaeAequorivita
Proteomesi
  • UP000006049 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini304 – 436DNA_LIGASE_A3InterPro annotationAdd BLAST133

Phylogenomic databases

KOiK10747
OMAiWLFEESY
OrthoDBiPOG091H09SJ

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit

Sequencei

Sequence statusi: Complete.

I3YUI4-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKDFAQLIKK LDSTNKTNEK VAALTAYFQN ANDDDKLWTI AILSHRRPKR
60 70 80 90 100
PVNTTLLRLW ATEISGIPLW LFEESYHIVG DLAETIALIL PTSEEHSEKS
110 120 130 140 150
LSTFVSEIIA LRTLPEEEKK KYLHYNWLAL NYFERFVFNK ILTGSFRIGV
160 170 180 190 200
SQKLMTRALS KATAIDEDIL AYKLMGDWTP EKTTFQKLIL EENPEDYLSK
210 220 230 240 250
PYPFYLAYAV EADFQKDLGA ISDWSFEHKW DGIRSQVIIR NDEVFVWSRG
260 270 280 290 300
EELVTDKYPE FQRFLSAIPN GTVIDGEILP FGAGEIGNFN ALQTRIGRKN
310 320 330 340 350
ISKALLKKTP VILNAYDLLE WQGEDIRQKP FSERRKILDE LIQKINSEEV
360 370 380 390 400
GIYLSETMNF ETWEEAAEER KLSREKRSEG LMLKRKDSPY LVGRKKGDWW
410 420 430 440 450
KWKIDPFTID AVLTYAMRGH GRRANLYTDY TFGLWNDGEL VTFAKAYSGL
460 470 480 490 500
TDAEFRQVDA WIKRNTLERF GPVRSVTPHH VFEIAFEGIA ESSRHKSGIA
510 520 530
TRFPRILRWR KDKPIAEANT LDDLKALIPK
Length:530
Mass (Da):61,454
Last modified:September 5, 2012 - v1
Checksum:i3D678C1D4DD2C3FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003280 Genomic DNA Translation: AFL80652.1
RefSeqiWP_014781910.1, NC_018013.1

Genome annotation databases

EnsemblBacteriaiAFL80652; AFL80652; Aeqsu_1156
KEGGiasl:Aeqsu_1156
PATRICifig|746697.3.peg.1170

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003280 Genomic DNA Translation: AFL80652.1
RefSeqiWP_014781910.1, NC_018013.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAFL80652; AFL80652; Aeqsu_1156
KEGGiasl:Aeqsu_1156
PATRICifig|746697.3.peg.1170

Phylogenomic databases

KOiK10747
OMAiWLFEESY
OrthoDBiPOG091H09SJ

Enzyme and pathway databases

BioCyciASUB746697:G1H5O-1152-MONOMER

Family and domain databases

Gene3Di1.10.3260.10, 1 hit
InterProiView protein in InterPro
IPR026333 ATP_dep_DNA_lig_pp_1105_fam
IPR012309 DNA_ligase_ATP-dep_C
IPR012310 DNA_ligase_ATP-dep_cent
IPR012308 DNA_ligase_ATP-dep_N
IPR036599 DNA_ligase_N_sf
IPR012340 NA-bd_OB-fold
PfamiView protein in Pfam
PF04679 DNA_ligase_A_C, 1 hit
PF01068 DNA_ligase_A_M, 1 hit
PF04675 DNA_ligase_A_N, 1 hit
SUPFAMiSSF117018 SSF117018, 1 hit
SSF50249 SSF50249, 1 hit
TIGRFAMsiTIGR04120 DNA_lig_bact, 1 hit
PROSITEiView protein in PROSITE
PS50160 DNA_LIGASE_A3, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiI3YUI4_AEQSU
AccessioniPrimary (citable) accession number: I3YUI4
Entry historyiIntegrated into UniProtKB/TrEMBL: September 5, 2012
Last sequence update: September 5, 2012
Last modified: February 28, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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