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Protein
Submitted name:

Cytoplasmic polyadenylation element binding protein 4

Gene

CPEB4

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic polyadenylation element binding protein 4Imported
Gene namesi
Name:CPEB4Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000021763

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini464 – 551RRMInterPro annotationAdd BLAST88
Domaini572 – 650RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiKOG0129 Eukaryota
ENOG410Y1XZ LUCA
GeneTreeiENSGT00390000012886
InParanoidiI3NBL6
OrthoDBiEOG091G0AO9
TreeFamiTF317658

Family and domain databases

Gene3Di3.30.40.130, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR032296 CEBP_ZZ
IPR038446 CEBP_ZZ_sf
IPR034819 CPEB
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PANTHERiPTHR12566 PTHR12566, 1 hit
PfamiView protein in Pfam
PF16366 CEBP_ZZ, 1 hit
PF16367 RRM_7, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequencei

Sequence statusi: Complete.

I3NBL6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDYGFGVLV QSNTGNKSAF PVRFHPHLQP PHHHQNATPN PAAFINNNTA
60 70 80 90 100
ANGSSAGSAW LFPAPATHNI QDEILGSEKA KSQQQEQQDP LEKQQLSPSP
110 120 130 140 150
GQEAGILPET EKAKSEENQG DSSSENSNGK EKIRIESPVL TGFDYQEATG
160 170 180 190 200
LGTSTQPLTS SASSLTGFSN WSAAIAPSSS TIINEDASFF HQGGVPAASA
210 220 230 240 250
NNGALLFQNF PHHVSPGFGG SFSPQIGPLS QHHPHHPHFQ HHHSQHQQQR
260 270 280 290 300
RSPASPHPPP FTHRSAAFNQ LPHLANNLNK PPSPWSSYQS PSPTPSSSWS
310 320 330 340 350
PGGGGYGGWG GSQGRDHRRG LNGGITPLNS ISPLKKNFAS NHIQLQKYAR
360 370 380 390 400
PTSAFAPKSW MEDSLNRADN IFPFPDRPRT FDMHSLESSL IDIMRAENDS
410 420 430 440 450
IKGRLNYSYP GSDSSLLING QSSLFPMEDG FLDDGRGDQP LHGGLGSPHC
460 470 480 490 500
FTHQNGERVE RYSRKVFVGG LPPDIDEDEI TASFRRFGPL IVDWPHKAES
510 520 530 540 550
KSYFPPKGYA FLLFQDESSV QALIDACIEE EGKLYLCVSS PTIKDKPVQI
560 570 580 590 600
RPWNLSDSDF VMDGSQPLDP RKTIFVGGVP RPLRAVELAM IMDRLYGGVC
610 620 630 640 650
YAGIDTDPEL KYPKGAGRVA FSNQQSYIAA ISARFVQLQH GEIDKRVEVK
660 670 680 690 700
PYVLDDQLCD ECQGARCGGK FAPFFCANVT CLQYYCEYCW AAIHSRAGRE
710 720
FHKPLVKEGG DRPRHISFRW N
Length:721
Mass (Da):79,136
Last modified:November 22, 2017 - v2
Checksum:iBB5B14D121F32297
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01075363 Genomic DNA No translation available.
RefSeqiXP_005334166.1, XM_005334109.2

Genome annotation databases

EnsembliENSSTOT00000028654; ENSSTOP00000021763; ENSSTOG00000020645
GeneIDi101975060

Similar proteinsi

Entry informationi

Entry nameiI3NBL6_ICTTR
AccessioniPrimary (citable) accession number: I3NBL6
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 34 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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