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Protein
Submitted name:

Contactin 3

Gene

CNTN3

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Contactin 3Imported
Gene namesi
Name:CNTN3Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 18Sequence analysisAdd BLAST18
ChainiPRO_501163705519 – 1028Sequence analysisAdd BLAST1010

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000009676

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini26 – 117Ig-likeInterPro annotationAdd BLAST92
Domaini122 – 208Ig-likeInterPro annotationAdd BLAST87
Domaini227 – 313Ig-likeInterPro annotationAdd BLAST87
Domaini318 – 402Ig-likeInterPro annotationAdd BLAST85
Domaini408 – 497Ig-likeInterPro annotationAdd BLAST90
Domaini499 – 593Ig-likeInterPro annotationAdd BLAST95
Domaini600 – 698Fibronectin type-IIIInterPro annotationAdd BLAST99
Domaini703 – 800Fibronectin type-IIIInterPro annotationAdd BLAST98
Domaini805 – 901Fibronectin type-IIIInterPro annotationAdd BLAST97
Domaini902 – 998Fibronectin type-IIIInterPro annotationAdd BLAST97

Keywords - Domaini

RepeatSAAS annotation, SignalSequence analysis

Phylogenomic databases

eggNOGiKOG3513 Eukaryota
ENOG410XSVG LUCA
GeneTreeiENSGT00760000118840
InParanoidiI3MG41
OrthoDBiEOG091G00X7
TreeFamiTF351103

Family and domain databases

CDDicd00063 FN3, 4 hits
Gene3Di2.60.40.10, 10 hits
InterProiView protein in InterPro
IPR003961 FN3_dom
IPR036116 FN3_sf
IPR007110 Ig-like_dom
IPR036179 Ig-like_dom_sf
IPR013783 Ig-like_fold
IPR013098 Ig_I-set
IPR003599 Ig_sub
IPR003598 Ig_sub2
PfamiView protein in Pfam
PF00041 fn3, 4 hits
PF07679 I-set, 2 hits
SMARTiView protein in SMART
SM00060 FN3, 4 hits
SM00409 IG, 6 hits
SM00408 IGc2, 6 hits
SUPFAMiSSF48726 SSF48726, 6 hits
SSF49265 SSF49265, 2 hits
PROSITEiView protein in PROSITE
PS50853 FN3, 4 hits
PS50835 IG_LIKE, 6 hits

Sequencei

Sequence statusi: Complete.

I3MG41-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMLSWKQLLL LSFIGCLGGE LLLQGPVFIK EPSNSIFPVG SEDTKITLNC
60 70 80 90 100
EARGNPSPHY RWQLNGSDID MSLEHRYKLN GGNLVVLNPN RNWDTGSYQC
110 120 130 140 150
FATNSLGTIV SREAKLQFAY LENFKTKMRS AVSVREGQGV VLLCGPPPHS
160 170 180 190 200
GELSYAWIFN EYPSFVEEDS RRFVSQETGH LYIAKVEPSD VGNYTCVVTN
210 220 230 240 250
MVTHARVLGS PTPLMLRSDG VMGEYEPKIE VQFAETLPAA KGSTVKLECF
260 270 280 290 300
ALGNPVPQIN WRRSDGMPFP SKIKLRKFNG VLEIPTFQQE DAGSYECIAE
310 320 330 340 350
NSRGKNVARG RLTYYAKPHL VQLIKDVEMA VEESLYWECR ASGKPKPSYR
360 370 380 390 400
WLKNGDALVL EERIQIENGA LTISNLNVTD SGMFQCIAEN KHGLVYSSAE
410 420 430 440 450
LKVVASAPDF SKNPMKKLVQ AQVGSLVSLD CKPRASPRAL SFWKKGDTVV
460 470 480 490 500
QEQERFSFLK DGGLKIDNVT KADSGTYTCT AENQFGKANG TTQLVVTEPT
510 520 530 540 550
RITLAPSNMD VSVGESVILP CQAQHDPLLD IMFTWYFNGA LTDFKKDGSH
560 570 580 590 600
FEKVGGSSSG DLMIRNIQLT HSGKYVCMVH TGVDSVSSAA ELIVRGSPGP
610 620 630 640 650
PGNVKVEEIT DSTAQLSWKE GTDNHSPVIS YAIQARTPFS VGWQTVTTVP
660 670 680 690 700
EVIDGKTHTA TVVELNPWVE YEFRVVASNK IGGGEPSLPS EKVRTEEAVP
710 720 730 740 750
EVPPSEVSGG GGSRSELVIT WDPVPEELQN GEGFGYVVAF RPLGVTNWIQ
760 770 780 790 800
TVVTSPDTPR YVFRNESIMP FSPYEVKVGV YNNRGEGPFS PVTTVFSAEE
810 820 830 840 850
EPTMAPTEVS AHSLSSSEIE VLWNTIPWKL SNGHLLGYEV RYWVSGEEQE
860 870 880 890 900
SSSKVRVAGN ETSARLRGLK SNLAYYAAVR AYNSAGTGPF SATVNATTKK
910 920 930 940 950
TPPSQPPGNV VWNATDTKVL LNWEQVKAME NESEVTGYKV FYRTSSQNSV
960 970 980 990 1000
QVLNTNKTSA ELVLPFQEDY IIEVKATTDG GDGTSSEQIR IPRITNMDAR
1010 1020
GSTSAISNVH PVSSYIPMVL FFLVNALW
Length:1,028
Mass (Da):113,018
Last modified:November 22, 2017 - v2
Checksum:iC1346FC58119DAC4
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01073802 Genomic DNA No translation available.
AGTP01073803 Genomic DNA No translation available.
AGTP01073804 Genomic DNA No translation available.
AGTP01073805 Genomic DNA No translation available.
AGTP01073806 Genomic DNA No translation available.
AGTP01073807 Genomic DNA No translation available.
AGTP01073808 Genomic DNA No translation available.
RefSeqiXP_005333943.1, XM_005333886.1

Genome annotation databases

EnsembliENSSTOT00000010784; ENSSTOP00000009676; ENSSTOG00000010775
GeneIDi101955117

Similar proteinsi

Entry informationi

Entry nameiI3MG41_ICTTR
AccessioniPrimary (citable) accession number: I3MG41
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: March 28, 2018
This is version 35 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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