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Protein
Submitted name:

Uncharacterized protein

Gene

ARMC5

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ARMC5Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000002956

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati193 – 236ARMPROSITE-ProRule annotationAdd BLAST44
Domaini748 – 808BTBInterPro annotationAdd BLAST61

Phylogenomic databases

eggNOGiENOG410JR1T Eukaryota
ENOG410XVAI LUCA
GeneTreeiENSGT00390000009109
InParanoidiI3M214
OMAiNQHREKY
OrthoDBiEOG091G01K3
TreeFamiTF337762

Family and domain databases

Gene3Di1.25.10.10, 3 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR000225 Armadillo
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
PfamiView protein in Pfam
PF00651 BTB, 1 hit
SMARTiView protein in SMART
SM00185 ARM, 5 hits
SUPFAMiSSF48371 SSF48371, 2 hits
SSF54695 SSF54695, 1 hit
PROSITEiView protein in PROSITE
PS50176 ARM_REPEAT, 1 hit
PS50097 BTB, 1 hit

Sequencei

Sequence statusi: Complete.

I3M214-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAAKPTLTD SLSFCLSQLT AAAGEGQGGE KDPASNETPL GRALLALRTR
60 70 80 90 100
HIKAAGGIER FRARGGLRPL LALLRRAAAA DPAPSEAGPG SAPSSVASAA
110 120 130 140 150
SGPAPSSDST HSVGSTPSPP VRLRKTLDLA LSILANCCTE GACRAEVRRL
160 170 180 190 200
GGILPLVTIL QCVKTDSIQN RTARALGNLA MEPESCGDIH SAGAVPLLVE
210 220 230 240 250
SLTACQDSQC LQSVVRALRN LADSPQHRLA LAQQGAVRPL AELLAAAPDP
260 270 280 290 300
ALTSALVRAL LELSRGCSRA CAEQLSLGGG LGPLVSLTSH PKRAVREATI
310 320 330 340 350
LILANLCAQG LVRPALGNAG GVEVLLGELR RRRSTNGASS ASQQPLVRAV
360 370 380 390 400
CLLCREAINR ARLRDAGGLE LLMGLLRDPR ASAWHPRVVA ALVGFLYDTG
410 420 430 440 450
ALGRLQALGL VPLLAGQLCG EAGDEEEEGT EAASWDFPEE RTPERPEAGS
460 470 480 490 500
FRSLRSWLIS EGYAAGPGDI SPDWSPERCP LPEPAEPVSP TPGQTSLQTP
510 520 530 540 550
RTLRMQGRSP AASAPEEPWG REGPALLLLS RFSQAPDPSG ALVTGPALCG
560 570 580 590 600
LLAYVTGAPG PPSPRALRIL ARLTCNPACL EAFVRSYGAA LLRAWLVLGV
610 620 630 640 650
APDDWPAPRA RPALQSQHRE LGEMLLQNLT VQAESPFGVG ALTHLLLSGS
660 670 680 690 700
SEERVACALT LPFICRKPSL WRRLLLDQGG LRLLLTALTR PAPHPLFLFF
710 720 730 740 750
AADSLSCLQG LVSPTASPAF PPAIPLDLEP PSPCLYEPML GPAPVPAPDL
760 770 780 790 800
HFLLDSGLQL PAQRAASAMA SPFFRALLSG SFAEAQMNLV PLRGLSPSAA
810 820 830 840 850
WPILHHLHGC RGCGAALGPV PPPGQPLLGS EAEEALEAAG RFLLPGLEEE
860 870 880 890 900
LEEAVGRIHL GPQGGPQSVG EVFRLGRPRL AAHCARWTLG PGQCPRKRAL
910 920 930
ALVGLVEAAG EEAGLLTEAL LAVVMGIESN G
Length:931
Mass (Da):97,106
Last modified:July 11, 2012 - v1
Checksum:iFACEDDEF2F307489
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01053724 Genomic DNA No translation available.
RefSeqiXP_005328622.1, XM_005328565.2

Genome annotation databases

EnsembliENSSTOT00000003305; ENSSTOP00000002956; ENSSTOG00000003309
GeneIDi101955980

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01053724 Genomic DNA No translation available.
RefSeqiXP_005328622.1, XM_005328565.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000002956

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSTOT00000003305; ENSSTOP00000002956; ENSSTOG00000003309
GeneIDi101955980

Organism-specific databases

CTDi79798

Phylogenomic databases

eggNOGiENOG410JR1T Eukaryota
ENOG410XVAI LUCA
GeneTreeiENSGT00390000009109
InParanoidiI3M214
OMAiNQHREKY
OrthoDBiEOG091G01K3
TreeFamiTF337762

Family and domain databases

Gene3Di1.25.10.10, 3 hits
InterProiView protein in InterPro
IPR011989 ARM-like
IPR016024 ARM-type_fold
IPR000225 Armadillo
IPR000210 BTB/POZ_dom
IPR011333 SKP1/BTB/POZ_sf
PfamiView protein in Pfam
PF00651 BTB, 1 hit
SMARTiView protein in SMART
SM00185 ARM, 5 hits
SUPFAMiSSF48371 SSF48371, 2 hits
SSF54695 SSF54695, 1 hit
PROSITEiView protein in PROSITE
PS50176 ARM_REPEAT, 1 hit
PS50097 BTB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiI3M214_ICTTR
AccessioniPrimary (citable) accession number: I3M214
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: October 10, 2018
This is version 32 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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