Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

ITGBL1

Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:ITGBL1Imported
OrganismiIctidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported
Taxonomic identifieri43179 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciuromorphaSciuridaeXerinaeMarmotiniIctidomys
Proteomesi
  • UP000005215 Componenti: Unassembled WGS sequence

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 23Sequence analysisAdd BLAST23
ChainiPRO_501163135124 – 494Sequence analysisAdd BLAST471

Interactioni

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000002739

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini95 – 127EGF-likeInterPro annotationAdd BLAST33
Domaini142 – 179EGF-likeInterPro annotationAdd BLAST38
Domaini184 – 217EGF-likeInterPro annotationAdd BLAST34
Domaini275 – 311EGF-likeInterPro annotationAdd BLAST37
Domaini367 – 399EGF-likeInterPro annotationAdd BLAST33

Keywords - Domaini

SignalSequence analysis

Phylogenomic databases

eggNOGiKOG1226 Eukaryota
ENOG410XP60 LUCA
GeneTreeiENSGT00760000119064
InParanoidiI3M1M1
OrthoDBiEOG091G05SQ
TreeFamiTF332636

Family and domain databases

InterProiView protein in InterPro
IPR000742 EGF-like_dom
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 4 hits
SMARTiView protein in SMART
SM00181 EGF, 5 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

I3M1M1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCPPGLGHFL LLASSLLLAG LSAVPQSFSP SLRSSSGAPC RLSRAESERR
60 70 80 90 100
CRAPGQPPGG ALCHGRGRCE CGVCICHVTE PGTYFGPLCE CHEWVCETYD
110 120 130 140 150
GSTCAGHGTC DCGKCRCDAG WSGDACQYPT NCNLTRKKSN QMCKNSQDVI
160 170 180 190 200
CSNAGTCHCG RCKCDDSDGN GLVYGKFCEC DDRECIDDET EEICGGHGKC
210 220 230 240 250
YCGNCYCEAG WHGDKCEFQC DIPPWESKRR CTAPDGRVCS NRGTCVCGEC
260 270 280 290 300
SCHDVDPTGD WGDIHGDTCE CDERDCRAVY DRYSDDFCSG HGQCNCGRCD
310 320 330 340 350
CKAGWYGKKC EHPRSCLLSA EESIRKCQGG AELPCSGRGK CECGKCTCYP
360 370 380 390 400
PGDRRVYGKT CECDDRRCED LDGVVCGGHG TCSCGHCVCE RGWFGTLCQH
410 420 430 440 450
PRKCNMTEEQ SRSLCESADG ILCSGKGSCH CGKCICSAEE WYVSGEFCDC
460 470 480 490
DDRDCDKHDG LICTGNGICS CGNCECWDGW NGNACEIWLG TEYP
Length:494
Mass (Da):53,480
Last modified:November 22, 2017 - v2
Checksum:i672FC5233F3B374F
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A287CYL5A0A287CYL5_ICTTR
Uncharacterized protein
ITGBL1
370Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01004305 Genomic DNA No translation available.
AGTP01004306 Genomic DNA No translation available.
AGTP01004307 Genomic DNA No translation available.
AGTP01004308 Genomic DNA No translation available.
AGTP01004309 Genomic DNA No translation available.
AGTP01004310 Genomic DNA No translation available.
AGTP01004311 Genomic DNA No translation available.
AGTP01004312 Genomic DNA No translation available.
AGTP01004313 Genomic DNA No translation available.
RefSeqiXP_005317067.1, XM_005317010.2

Genome annotation databases

EnsembliENSSTOT00000003067; ENSSTOP00000002739; ENSSTOG00000003067
GeneIDi101970971

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AGTP01004305 Genomic DNA No translation available.
AGTP01004306 Genomic DNA No translation available.
AGTP01004307 Genomic DNA No translation available.
AGTP01004308 Genomic DNA No translation available.
AGTP01004309 Genomic DNA No translation available.
AGTP01004310 Genomic DNA No translation available.
AGTP01004311 Genomic DNA No translation available.
AGTP01004312 Genomic DNA No translation available.
AGTP01004313 Genomic DNA No translation available.
RefSeqiXP_005317067.1, XM_005317010.2

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi43179.ENSSTOP00000002739

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSTOT00000003067; ENSSTOP00000002739; ENSSTOG00000003067
GeneIDi101970971

Organism-specific databases

CTDi9358

Phylogenomic databases

eggNOGiKOG1226 Eukaryota
ENOG410XP60 LUCA
GeneTreeiENSGT00760000119064
InParanoidiI3M1M1
OrthoDBiEOG091G05SQ
TreeFamiTF332636

Family and domain databases

InterProiView protein in InterPro
IPR000742 EGF-like_dom
IPR013111 EGF_extracell
IPR027070 Integrin_b-like_p1
IPR015812 Integrin_bsu
PANTHERiPTHR10082 PTHR10082, 1 hit
PTHR10082:SF3 PTHR10082:SF3, 1 hit
PfamiView protein in Pfam
PF07974 EGF_2, 4 hits
SMARTiView protein in SMART
SM00181 EGF, 5 hits
PROSITEiView protein in PROSITE
PS00243 INTEGRIN_BETA, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiI3M1M1_ICTTR
AccessioniPrimary (citable) accession number: I3M1M1
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: October 10, 2018
This is version 39 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again