UniProtKB - I3M053 (I3M053_ICTTR)
Protein
RING-type E3 ubiquitin transferase
Gene
RNF138
Organism
Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)
Status
Functioni
Catalytic activityi
- S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine.ARBA annotation EC:2.3.2.27
: protein ubiquitination Pathwayi
This protein is involved in the pathway protein ubiquitination, which is part of Protein modification.ARBA annotationView all proteins of this organism that are known to be involved in the pathway protein ubiquitination and in Protein modification.
GO - Molecular functioni
- metal ion binding Source: UniProtKB-KW
- protein kinase binding Source: Ensembl
- single-stranded DNA binding Source: Ensembl
- ubiquitin protein ligase activity Source: Ensembl
GO - Biological processi
- cellular response to leukemia inhibitory factor Source: Ensembl
- DNA double-strand break processing involved in repair via single-strand annealing Source: Ensembl
- double-strand break repair via homologous recombination Source: Ensembl
Keywordsi
Ligand | Metal-binding, Zinc |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Names & Taxonomyi
Protein namesi | |
Gene namesi | Name:RNF138Imported |
Organismi | Ictidomys tridecemlineatus (Thirteen-lined ground squirrel) (Spermophilus tridecemlineatus)Imported |
Taxonomic identifieri | 43179 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Glires › Rodentia › Sciuromorpha › Sciuridae › Xerinae › Marmotini › Ictidomys |
Proteomesi |
|
Subcellular locationi
Other locations
- site of double-strand break Source: Ensembl
Interactioni
GO - Molecular functioni
- protein kinase binding Source: Ensembl
Protein-protein interaction databases
STRINGi | 43179.ENSSTOP00000002049 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 18 – 58 | RING-typeInterPro annotationAdd BLAST | 41 | |
Domaini | 86 – 105 | C2HC RNF-typeInterPro annotationAdd BLAST | 20 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 125 – 152 | DisorderedSequence analysisAdd BLAST | 28 |
Keywords - Domaini
Zinc-fingerPROSITE-ProRule annotationARBA annotationPhylogenomic databases
eggNOGi | ENOG502RP2G, Eukaryota |
GeneTreei | ENSGT00950000182909 |
HOGENOMi | CLU_092448_0_0_1 |
InParanoidi | I3M053 |
OMAi | QETNFTR |
OrthoDBi | 1097558at2759 |
TreeFami | TF331012 |
Family and domain databases
Gene3Di | 3.30.40.10, 1 hit |
InterProi | View protein in InterPro IPR008598, Di19_Zn_binding_dom IPR034734, ZF_C2HC_RNF IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF05605, zf-Di19, 1 hit PF18574, zf_C2HC_14, 1 hit |
SMARTi | View protein in SMART SM00184, RING, 2 hits |
PROSITEi | View protein in PROSITE PS51803, ZF_C2HC_RNF, 1 hit PS50089, ZF_RING_2, 1 hit |
i Sequence
Sequence statusi: Complete.
I3M053-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MAEELSAATA YTEDDFYCPV CQEVLKTPVR TAACQHVFCR KCFLTAMRES
60 70 80 90 100
GIHCPLCRGN VTRRERACPE RALDLENIMR KFSGSCRCCA KQIKFYRMRH
110 120 130 140 150
HYKSCKKYQD EYGVSSIIPN FQISQDSVGN SNRSETSTSD NTETYQENTS
160 170 180 190 200
SGNPTFKCPL CQESNFTRQR LLDHCNSNHL FQIVPVTCPI CVSLPWGDPS
210 220 230 240
QITRNFVSHL NQRHQFDYGE FVNLQLDEET QYQTAVEESF QVNI
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AGTP01093398 Genomic DNA No translation available. |
RefSeqi | XP_005337508.1, XM_005337451.2 |
Genome annotation databases
Ensembli | ENSSTOT00000002292; ENSSTOP00000002049; ENSSTOG00000002293 |
GeneIDi | 101976488 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AGTP01093398 Genomic DNA No translation available. |
RefSeqi | XP_005337508.1, XM_005337451.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 43179.ENSSTOP00000002049 |
Genome annotation databases
Ensembli | ENSSTOT00000002292; ENSSTOP00000002049; ENSSTOG00000002293 |
GeneIDi | 101976488 |
Organism-specific databases
CTDi | 51444 |
Phylogenomic databases
eggNOGi | ENOG502RP2G, Eukaryota |
GeneTreei | ENSGT00950000182909 |
HOGENOMi | CLU_092448_0_0_1 |
InParanoidi | I3M053 |
OMAi | QETNFTR |
OrthoDBi | 1097558at2759 |
TreeFami | TF331012 |
Enzyme and pathway databases
UniPathwayi | UPA00143 |
Family and domain databases
Gene3Di | 3.30.40.10, 1 hit |
InterProi | View protein in InterPro IPR008598, Di19_Zn_binding_dom IPR034734, ZF_C2HC_RNF IPR001841, Znf_RING IPR013083, Znf_RING/FYVE/PHD |
Pfami | View protein in Pfam PF05605, zf-Di19, 1 hit PF18574, zf_C2HC_14, 1 hit |
SMARTi | View protein in SMART SM00184, RING, 2 hits |
PROSITEi | View protein in PROSITE PS51803, ZF_C2HC_RNF, 1 hit PS50089, ZF_RING_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | I3M053_ICTTR | |
Accessioni | I3M053Primary (citable) accession number: I3M053 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 11, 2012 |
Last sequence update: | July 11, 2012 | |
Last modified: | October 7, 2020 | |
This is version 46 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |