Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Uncharacterized protein

Gene

PSD3

Organism
Sus scrofa (Pig)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:PSD3Imported
OrganismiSus scrofa (Pig)Imported
Taxonomic identifieri9823 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaLaurasiatheriaCetartiodactylaSuinaSuidaeSus
Proteomesi
  • UP000008227 Componenti: Chromosome 17

PTM / Processingi

Proteomic databases

PaxDbiI3L6H3
PRIDEiI3L6H3

Expressioni

Gene expression databases

BgeeiENSSSCG00000022028 Expressed in 5 organ(s), highest expression level in prefrontal cortex
ExpressionAtlasiI3L6H3 baseline and differential

Interactioni

GO - Molecular functioni

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000019624

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini13 – 198SEC7InterPro annotationAdd BLAST186
Domaini249 – 362PHInterPro annotationAdd BLAST114

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili390 – 410Sequence analysisAdd BLAST21

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0932 Eukaryota
COG5307 LUCA
GeneTreeiENSGT00920000149004
InParanoidiI3L6H3
KOiK12494
OrthoDBiEOG091G03X6

Family and domain databases

CDDicd00171 Sec7, 1 hit
Gene3Di1.10.1000.11, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR011993 PH-like_dom_sf
IPR001605 PH_dom-spectrin-type
IPR001849 PH_domain
IPR023394 Sec7_C_sf
IPR000904 Sec7_dom
IPR035999 Sec7_dom_sf
PfamiView protein in Pfam
PF01369 Sec7, 1 hit
PRINTSiPR00683 SPECTRINPH
SMARTiView protein in SMART
SM00233 PH, 1 hit
SM00222 Sec7, 1 hit
SUPFAMiSSF48425 SSF48425, 1 hit
PROSITEiView protein in PROSITE
PS50003 PH_DOMAIN, 1 hit
PS50190 SEC7, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

I3L6H3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSWCLSSCC NAGVKTALLE AHSEMGSTEI LEKETSGSLS NGTSSNVEAA
60 70 80 90 100
KRLAKRLYQL DRFKRSDVAK HLGKNNEFSR LVAEEYLKFF DFTGMTLDQS
110 120 130 140 150
LRYFFKAFSL VGETQERERV LIHFSNRYFY CNPDTIASQD GVHCLTCAVM
160 170 180 190 200
LLNTDLHGHN IGKKMTCQEF IANLQGVDEG GDFSKDLLKA LYNSIKNEKL
210 220 230 240 250
EWAVDDEEKK KSLSEGTDEK ANGTHPKTIS RIGSTTNPFL DIPHDPNAAV
260 270 280 290 300
YKSGFLARKI HADMDGKKTP RGKRGWKTFY AVLKGTVLYL QKDEYKPEKA
310 320 330 340 350
LSEEDLKNAV SVHHALASQA TDYEKKPNVL KLKTADWRVL LFQAQSPEEM
360 370 380 390 400
QGWINKINCV AAVFSAPPFP AAIGSQKKFS RPLLPATTTK LSQEEQLKSH
410 420 430 440 450
ESKLKQISTE LAEHRSYPPD KKVKAKEVDE YRLKDHYLEF EKTRYEVYVR
460 470 480 490 500
VLKEGGAELL GSGGPAGLKK SHSSPSLNPD SSPVTAKVKR NVSERKDHRP
510
ETPSIKQKVT
Length:510
Mass (Da):57,261
Last modified:November 22, 2017 - v2
Checksum:i76D38CA712EEDBEB
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
F1SE18F1SE18_PIG
Uncharacterized protein
PSD3
1,010Annotation score:
A0A287A9D5A0A287A9D5_PIG
Uncharacterized protein
PSD3
1,278Annotation score:
A0A287AHS5A0A287AHS5_PIG
Uncharacterized protein
PSD3
978Annotation score:
A0A287ANS7A0A287ANS7_PIG
Uncharacterized protein
PSD3
1,043Annotation score:
A0A287AUU8A0A287AUU8_PIG
Uncharacterized protein
PSD3
1,100Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000105 Genomic DNA No translation available.
RefSeqiXP_003359925.2, XM_003359877.4
UniGeneiSsc.102445

Genome annotation databases

EnsembliENSSSCT00000028117; ENSSSCP00000019624; ENSSSCG00000007034
GeneIDi100623956
KEGGissc:100623956

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AEMK02000105 Genomic DNA No translation available.
RefSeqiXP_003359925.2, XM_003359877.4
UniGeneiSsc.102445

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9823.ENSSSCP00000019624

Proteomic databases

PaxDbiI3L6H3
PRIDEiI3L6H3

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSSSCT00000028117; ENSSSCP00000019624; ENSSSCG00000007034
GeneIDi100623956
KEGGissc:100623956

Organism-specific databases

CTDi23362

Phylogenomic databases

eggNOGiKOG0932 Eukaryota
COG5307 LUCA
GeneTreeiENSGT00920000149004
InParanoidiI3L6H3
KOiK12494
OrthoDBiEOG091G03X6

Gene expression databases

BgeeiENSSSCG00000022028 Expressed in 5 organ(s), highest expression level in prefrontal cortex
ExpressionAtlasiI3L6H3 baseline and differential

Family and domain databases

CDDicd00171 Sec7, 1 hit
Gene3Di1.10.1000.11, 1 hit
2.30.29.30, 1 hit
InterProiView protein in InterPro
IPR011993 PH-like_dom_sf
IPR001605 PH_dom-spectrin-type
IPR001849 PH_domain
IPR023394 Sec7_C_sf
IPR000904 Sec7_dom
IPR035999 Sec7_dom_sf
PfamiView protein in Pfam
PF01369 Sec7, 1 hit
PRINTSiPR00683 SPECTRINPH
SMARTiView protein in SMART
SM00233 PH, 1 hit
SM00222 Sec7, 1 hit
SUPFAMiSSF48425 SSF48425, 1 hit
PROSITEiView protein in PROSITE
PS50003 PH_DOMAIN, 1 hit
PS50190 SEC7, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiI3L6H3_PIG
AccessioniPrimary (citable) accession number: I3L6H3
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: November 22, 2017
Last modified: October 10, 2018
This is version 37 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again