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Protein
Submitted name:

Ribosomal L1 domain-containing protein 1

Gene

RSL1D1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal L1 domain-containing protein 1Imported
Gene namesi
Name:RSL1D1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000171490.12
HGNCiHGNC:24534 RSL1D1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000171490

PTM / Processingi

Proteomic databases

MaxQBiI3L3U9
PeptideAtlasiI3L3U9
PRIDEiI3L3U9

Expressioni

Gene expression databases

BgeeiENSG00000171490 Expressed in 237 organ(s), highest expression level in intestine
ExpressionAtlasiI3L3U9 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliI3L3U9
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili246 – 268Sequence analysisAdd BLAST23

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00440000038603

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
InterProiView protein in InterPro
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 2 hits
SUPFAMiSSF56808 SSF56808, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 9 potential isoforms that are computationally mapped.Show allAlign All

I3L3U9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDSASASLS SAAATGTSTS TPAAPTARKQ LDKEQVRKAV DALLTHCKSR
60 70 80 90 100
KNNYGLLLNE NESLFLMVVL WKIPSKELRV RLTLPHSIRS DSEDICLFTK
110 120 130 140 150
DEPNSTPEKT EQFYRKLLNK HGIKTVSQII SLQTLKKEYK SYEAKLRLLS
160 170 180 190 200
SFDFFLTDAR IRRLLPSLIG RHFYQRKNAI RIGHVGMQIE HIIENIVAVT
210 220 230 240 250
KGLSEKLPEK WESVKLLFVK TEKSAALPIF SSFVSNWDEA TKRSLLNKKK
260 270 280 290
KEARRKRRER NFEKQKERKK KRQQARKTAS VLSKDDVAPE SGDTTV
Length:296
Mass (Da):33,900
Last modified:July 11, 2012 - v1
Checksum:i3E775EEEF835A608
GO

Computationally mapped potential isoform sequencesi

There are 9 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
O76021RL1D1_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1 CATX11, CSIG, PBK1, L12
490Annotation score:
J3QSV6J3QSV6_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
430Annotation score:
I3L3C4I3L3C4_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
158Annotation score:
I3L234I3L234_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
98Annotation score:
I3L1Y4I3L1Y4_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
47Annotation score:
I3L1A3I3L1A3_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
93Annotation score:
I3L4T8I3L4T8_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
46Annotation score:
J3KPU7J3KPU7_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
39Annotation score:
I3L2F2I3L2F2_HUMAN
Ribosomal L1 domain-containing prot...
RSL1D1
43Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei296Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010654 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000573251; ENSP00000460748; ENSG00000171490
UCSCiuc059qxj.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC010654 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliI3L3U9
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiI3L3U9
PeptideAtlasiI3L3U9
PRIDEiI3L3U9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000573251; ENSP00000460748; ENSG00000171490
UCSCiuc059qxj.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000171490.12
HGNCiHGNC:24534 RSL1D1
OpenTargetsiENSG00000171490
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00440000038603

Miscellaneous databases

ChiTaRSiRSL1D1 human

Gene expression databases

BgeeiENSG00000171490 Expressed in 237 organ(s), highest expression level in intestine
ExpressionAtlasiI3L3U9 baseline and differential

Family and domain databases

CDDicd00403 Ribosomal_L1, 1 hit
Gene3Di3.40.50.790, 1 hit
InterProiView protein in InterPro
IPR023674 Ribosomal_L1-like
IPR028364 Ribosomal_L1/biogenesis
IPR016095 Ribosomal_L1_3-a/b-sand
PfamiView protein in Pfam
PF00687 Ribosomal_L1, 2 hits
SUPFAMiSSF56808 SSF56808, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiI3L3U9_HUMAN
AccessioniPrimary (citable) accession number: I3L3U9
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: September 12, 2018
This is version 44 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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