UniProtKB - I3L218 (I3L218_HUMAN)
Protein
Submitted name:
Trinucleotide repeat-containing gene 6A protein
Gene
TNRC6A
Organism
Homo sapiens (Human)
Status
Names & Taxonomyi
Protein namesi | Submitted name: Trinucleotide repeat-containing gene 6A proteinImported |
Gene namesi | Name:TNRC6AImported |
Organismi | Homo sapiens (Human)Imported |
Taxonomic identifieri | 9606 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Homo |
Proteomesi |
|
Organism-specific databases
HGNCi | HGNC:11969, TNRC6A |
VEuPathDBi | HostDB:ENSG00000090905.17 |
PTM / Processingi
Proteomic databases
MaxQBi | I3L218 |
PeptideAtlasi | I3L218 |
PRIDEi | I3L218 |
ProteomicsDBi | 46813 |
Expressioni
Gene expression databases
Bgeei | ENSG00000090905, Expressed in cerebellar vermis and 215 other tissues |
ExpressionAtlasi | I3L218, baseline and differential |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 14 – 76 | TNRC6-PABC_bdgInterPro annotationAdd BLAST | 63 |
Phylogenomic databases
GeneTreei | ENSGT00940000158180 |
HOGENOMi | CLU_2378110_0_0_1 |
Family and domain databases
InterProi | View protein in InterPro IPR032226, TNRC6_PABC-bd IPR033501, TNRC6A |
PANTHERi | PTHR13020:SF28, PTHR13020:SF28, 1 hit |
Pfami | View protein in Pfam PF16608, TNRC6-PABC_bdg, 1 hit |
(1+)i Sequence
Sequence statusi: Fragment.
This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All
I3L218-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
XHTTPELQKG PSPINAFSNF PIGLNSNLNV NMDMNSIKEP QSRLRKWTTV
60 70 80 90
DSISVNTSLD QNSSKHGFVT SGLTTDVAQI GVLRLTCADE KECRSD
Computationally mapped potential isoform sequencesi
There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketQ8NDV7 | TNR6A_HUMAN | Trinucleotide repeat-containing gen... | TNRC6A CAGH26, KIAA1460, TNRC6 | 1,962 | Annotation score: | ||
H7C269 | H7C269_HUMAN | Trinucleotide repeat-containing gen... | TNRC6A | 906 | Annotation score: | ||
H3BRT3 | H3BRT3_HUMAN | Trinucleotide repeat-containing gen... | TNRC6A | 160 | Annotation score: | ||
H3BTQ1 | H3BTQ1_HUMAN | Trinucleotide repeat-containing gen... | TNRC6A | 203 | Annotation score: | ||
I3L3S5 | I3L3S5_HUMAN | Trinucleotide repeat-containing gen... | TNRC6A | 40 | Annotation score: |
Experimental Info
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Non-terminal residuei | 1 | Imported | 1 |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC002565 Genomic DNA No translation available. AC008731 Genomic DNA No translation available. AC010321 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENST00000569376; ENSP00000459297; ENSG00000090905 |
UCSCi | uc059sfu.1, human |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC002565 Genomic DNA No translation available. AC008731 Genomic DNA No translation available. AC010321 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
Proteomic databases
MaxQBi | I3L218 |
PeptideAtlasi | I3L218 |
PRIDEi | I3L218 |
ProteomicsDBi | 46813 |
Genome annotation databases
Ensembli | ENST00000569376; ENSP00000459297; ENSG00000090905 |
UCSCi | uc059sfu.1, human |
Organism-specific databases
HGNCi | HGNC:11969, TNRC6A |
OpenTargetsi | ENSG00000090905 |
VEuPathDBi | HostDB:ENSG00000090905.17 |
GenAtlasi | Search... |
Phylogenomic databases
GeneTreei | ENSGT00940000158180 |
HOGENOMi | CLU_2378110_0_0_1 |
Miscellaneous databases
ChiTaRSi | TNRC6A, human |
Gene expression databases
Bgeei | ENSG00000090905, Expressed in cerebellar vermis and 215 other tissues |
ExpressionAtlasi | I3L218, baseline and differential |
Family and domain databases
InterProi | View protein in InterPro IPR032226, TNRC6_PABC-bd IPR033501, TNRC6A |
PANTHERi | PTHR13020:SF28, PTHR13020:SF28, 1 hit |
Pfami | View protein in Pfam PF16608, TNRC6-PABC_bdg, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | I3L218_HUMAN | |
Accessioni | I3L218Primary (citable) accession number: I3L218 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | July 11, 2012 |
Last sequence update: | July 11, 2012 | |
Last modified: | February 10, 2021 | |
This is version 42 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) | |
Disclaimer | Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. |