Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

Lipopolysaccharide-induced tumor necrosis factor-alpha factor

Gene

LITAF

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Names & Taxonomyi

Protein namesi
Submitted name:
Lipopolysaccharide-induced tumor necrosis factor-alpha factorImported
Gene namesi
Name:LITAFImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000189067.12
HGNCiHGNC:16841 LITAF

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei111 – 136HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000189067

PTM / Processingi

Proteomic databases

PeptideAtlasiI3L1I9

Expressioni

Gene expression databases

BgeeiENSG00000189067 Expressed in 237 organ(s), highest expression level in epithelium of bronchus
ExpressionAtlasiI3L1I9 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini76 – 137LITAFInterPro annotationAdd BLAST62

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiENOG410IVVU Eukaryota
ENOG41122PJ LUCA
GeneTreeiENSGT00540000071542

Family and domain databases

InterProiView protein in InterPro
IPR006629 LITAF
IPR037519 LITAF_fam
PANTHERiPTHR23292 PTHR23292, 1 hit
PfamiView protein in Pfam
PF10601 zf-LITAF-like, 1 hit
PROSITEiView protein in PROSITE
PS51837 LITAF, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 12 potential isoforms that are computationally mapped.Show allAlign All

I3L1I9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSVPGPYQAA TGPSSAPSAP PSYEETVAVN SYYPTPPAPM PGPTTGLVTG
60 70 80 90 100
PDGKGMNPPS YYTQPAPIPN NNPITVQTVY VQHPITFLDR PIQMCCPSCN
110 120 130
KMIVSQLSYN AGALTWLSCG SLCLLGCIAG CCFIPFC
Length:137
Mass (Da):14,361
Last modified:July 11, 2012 - v1
Checksum:i2C5DA1B6B1A18534
GO

Computationally mapped potential isoform sequencesi

There are 12 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q99732LITAF_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF PIG7, SIMPLE
161Annotation score:
I3L1P1I3L1P1_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
136Annotation score:
I3L329I3L329_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
126Annotation score:
I3L3U8I3L3U8_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
153Annotation score:
I3L1H3I3L1H3_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
68Annotation score:
I3L2T6I3L2T6_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
105Annotation score:
I3L409I3L409_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
81Annotation score:
I3L2E2I3L2E2_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
75Annotation score:
I3L2T1I3L2T1_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
88Annotation score:
I3L1R0I3L1R0_HUMAN
Lipopolysaccharide-induced tumor ne...
LITAF
39Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei137Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007616 Genomic DNA No translation available.
AC099489 Genomic DNA No translation available.
KF456159 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000570798; ENSP00000458871; ENSG00000189067
UCSCiuc059qvr.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC007616 Genomic DNA No translation available.
AC099489 Genomic DNA No translation available.
KF456159 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiI3L1I9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000570798; ENSP00000458871; ENSG00000189067
UCSCiuc059qvr.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000189067.12
HGNCiHGNC:16841 LITAF
OpenTargetsiENSG00000189067
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410IVVU Eukaryota
ENOG41122PJ LUCA
GeneTreeiENSGT00540000071542

Miscellaneous databases

ChiTaRSiLITAF human

Gene expression databases

BgeeiENSG00000189067 Expressed in 237 organ(s), highest expression level in epithelium of bronchus
ExpressionAtlasiI3L1I9 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR006629 LITAF
IPR037519 LITAF_fam
PANTHERiPTHR23292 PTHR23292, 1 hit
PfamiView protein in Pfam
PF10601 zf-LITAF-like, 1 hit
PROSITEiView protein in PROSITE
PS51837 LITAF, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiI3L1I9_HUMAN
AccessioniPrimary (citable) accession number: I3L1I9
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: September 12, 2018
This is version 37 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again