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Protein
Submitted name:

RNA-binding protein fox-1 homolog 1

Gene

RBFOX1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein fox-1 homolog 1Imported
Gene namesi
Name:RBFOX1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000078328.19
HGNCiHGNC:18222 RBFOX1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000078328

PTM / Processingi

Proteomic databases

MaxQBiI3L1D4
PeptideAtlasiI3L1D4
PRIDEiI3L1D4

Expressioni

Gene expression databases

BgeeiENSG00000078328
ExpressionAtlasiI3L1D4 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliI3L1D4
SMRiI3L1D4
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini119 – 189RRMInterPro annotationAdd BLAST71

Phylogenomic databases

eggNOGiKOG0125 Eukaryota
ENOG4111WJT LUCA
GeneTreeiENSGT00390000013767

Family and domain databases

CDDicd12407 RRM_FOX1_like, 1 hit
Gene3Di3.30.70.330, 1 hit
InterProiView protein in InterPro
IPR034237 FOX1_RRM
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PfamiView protein in Pfam
PF00076 RRM_1, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 1 hit
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 1 hit

Sequencei

Sequence statusi: Fragment.

I3L1D4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEEKGSRMVQ QGNQEAAAAP DTMAQPYASA QFAPPQNGIP AEYTAPHPHP
60 70 80 90 100
APEYTGQTTV PEHTLNLYPP AQTHSEQSPA DTSAQTVSGT ATQTDDAAPT
110 120 130 140 150
DGQPQTQPSE NTENKSQPKR LHVSNIPFRF RDPDLRQMFG QFGKILDVEI
160 170 180
IFNERGSKGF GFVTFENSAD ADRAREKLHG TVVEGRKIE
Length:189
Mass (Da):20,661
Last modified:July 11, 2012 - v1
Checksum:i260D2E6DA6202F27
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei189Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005347 Genomic DNA No translation available.
AC005364 Genomic DNA No translation available.
AC005563 Genomic DNA No translation available.
AC005569 Genomic DNA No translation available.
AC005737 Genomic DNA No translation available.
AC012175 Genomic DNA No translation available.
AC023822 Genomic DNA No translation available.
AC074051 Genomic DNA No translation available.
KF495794 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000570626; ENSP00000458748; ENSG00000078328
UCSCiuc059qnc.1 human

Similar proteinsi

Entry informationi

Entry nameiI3L1D4_HUMAN
AccessioniPrimary (citable) accession number: I3L1D4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: March 28, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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