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Protein
Submitted name:

T-box transcription factor Tb

Gene
N/A
Organism
Oreochromis niloticus (Nile tilapia) (Tilapia nilotica)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T-box transcription factor TbImported
OrganismiOreochromis niloticus (Nile tilapia) (Tilapia nilotica)Imported
Taxonomic identifieri8128 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataOvalentariaCichlomorphaeCichliformesCichlidaeAfrican cichlidsPseudocrenilabrinaeOreochrominiOreochromis
Proteomesi
  • UP000005207 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi8128.ENSONIP00000012449

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585 Eukaryota
ENOG410XSTS LUCA
GeneTreeiENSGT00900000140847
InParanoidiI3JUA4
OMAiAPSCVYI
OrthoDBiEOG091G05OC
TreeFamiTF106341

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

I3JUA4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATGAGECPS KAVQYRVDHL LSAVESELQA GSEKGDPTER ELKVSLDESE
60 70 80 90 100
LWQKFKNLTN EMIVTKNGRR MFPVLKVSVS GLDPNAMYSF LLDFASADNH
110 120 130 140 150
RWKYVNGEWV PGGKPEPQTP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN
160 170 180 190 200
KLNGGGQIML NSLHKYEPRI HIVRVGGPRR MITSHSFPET QFIAVTAYQN
210 220 230 240 250
EEITALKIKY NPFAKAFLDA KERTDNKDIR EDASENQQSG YSQFSPLMET
260 270 280 290 300
VGSWFIPGTA PLCPSASPHS QFGSPISLSP SHGCERYSTL RNHRSAPYSS
310 320 330 340 350
PYTHQTNSPT SFSDNSSTCL SMLSSHDNWS SLQMPTHSSM IPMAHNSTSG
360 370 380 390 400
TSSSQYTSLW SVSNSPLTPV SQNGGINNCL SSQFLRGSSS YYPTLSHSVT
410 420 430 440
VPSSGSPMYD NSTATEVHDT AQYDLSPHGR LPSAWTPVTP PSL
Length:443
Mass (Da):48,695
Last modified:July 11, 2012 - v1
Checksum:iFB75B3CAC4C94B3C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AERX01006442 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSONIT00000012458; ENSONIP00000012449; ENSONIG00000009906

Similar proteinsi

Entry informationi

Entry nameiI3JUA4_ORENI
AccessioniPrimary (citable) accession number: I3JUA4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: June 20, 2018
This is version 42 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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