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Protein
Submitted name:

Ribosomal Protein, Large subunit

Gene

rpl-30

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • determination of adult lifespan Source: WormBase
  • translation Source: InterPro

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinImported

Enzyme and pathway databases

ReactomeiR-CEL-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-CEL-1799339 SRP-dependent cotranslational protein targeting to membrane
R-CEL-72689 Formation of a pool of free 40S subunits
R-CEL-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-CEL-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-CEL-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Submitted name:
Ribosomal Protein, Large subunitImported
Gene namesi
Name:rpl-30Imported
ORF Names:CELE_Y106G6H.3Imported, Y106G6H.3Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome I

Organism-specific databases

WormBaseiY106G6H.3c ; CE47526 ; WBGene00004444 ; rpl-30

Subcellular locationi

PTM / Processingi

Proteomic databases

PeptideAtlasiI2HAJ2

Expressioni

Gene expression databases

BgeeiWBGene00004444
ExpressionAtlasiI2HAJ2 baseline

Structurei

3D structure databases

ProteinModelPortaliI2HAJ2
SMRiI2HAJ2
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 86Ribosomal_L7AeInterPro annotationAdd BLAST85

Phylogenomic databases

eggNOGiKOG2988 Eukaryota
COG1911 LUCA
GeneTreeiENSGT00390000012138

Family and domain databases

Gene3Di3.30.1330.30, 1 hit
InterProiView protein in InterPro
IPR029064 L30e-like
IPR000231 Ribosomal_L30e
IPR022991 Ribosomal_L30e_CS
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45
PANTHERiPTHR11449:SF1 PTHR11449:SF1, 1 hit
PfamiView protein in Pfam
PF01248 Ribosomal_L7Ae, 1 hit
SUPFAMiSSF55315 SSF55315, 1 hit
PROSITEiView protein in PROSITE
PS00993 RIBOSOMAL_L30E_2, 1 hit

Sequencei

Sequence statusi: Complete.

I2HAJ2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVMKTGQYVL GYKQTLKSLL NGKAKLVIIA NNTPPLRKSE IEYYAMLAKT
60 70 80 90
GVHHYNGNNI ELGTACGRLF RVCTLAVTDA GDSDIILSVP SESA
Length:94
Mass (Da):10,188
Last modified:July 11, 2012 - v1
Checksum:iF0C45A21732225C9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284601 Genomic DNA Translation: CCH63920.1
RefSeqiNP_001263476.1, NM_001276547.1
UniGeneiCel.6902

Genome annotation databases

EnsemblMetazoaiY106G6H.3c.1; Y106G6H.3c.1; WBGene00004444
Y106G6H.3c.2; Y106G6H.3c.2; WBGene00004444
GeneIDi172921

Similar proteinsi

Entry informationi

Entry nameiI2HAJ2_CAEEL
AccessioniPrimary (citable) accession number: I2HAJ2
Entry historyiIntegrated into UniProtKB/TrEMBL: July 11, 2012
Last sequence update: July 11, 2012
Last modified: February 28, 2018
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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