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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Oryza glaberrima (African rice)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiOryza glaberrima (African rice)Imported
Taxonomic identifieri4538 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaLiliopsidaPoalesPoaceaeBOP cladeOryzoideaeOryzeaeOryzinaeOryza
Proteomesi
  • UP000007306 Componenti: Unassembled WGS sequence

Subcellular locationi

Interactioni

Protein-protein interaction databases

STRINGi4538.ORGLA02G0093500.1

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini61 – 322WD_REPEATS_REGIONInterPro annotationAdd BLAST262
Repeati107 – 149WDPROSITE-ProRule annotationAdd BLAST43
Repeati150 – 192WDPROSITE-ProRule annotationAdd BLAST43
Repeati193 – 235WDPROSITE-ProRule annotationAdd BLAST43
Repeati237 – 279WDPROSITE-ProRule annotationAdd BLAST43

Keywords - Domaini

WD repeatPROSITE-ProRule annotation

Phylogenomic databases

eggNOGiKOG0277 Eukaryota
ENOG410XNVU LUCA
OMAiNYDFTTR
OrthoDBiEOG09360EQB

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR019775 WD40_repeat_CS
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PfamiView protein in Pfam
PF00400 WD40, 4 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 6 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS00678 WD_REPEATS_1, 1 hit
PS50082 WD_REPEATS_2, 4 hits
PS50294 WD_REPEATS_REGION, 1 hit

Sequencei

Sequence statusi: Complete.

I1NYX9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPAFKAPAPG FSVRFSPFHE QRLLAAASQH FGLVGNGHLI VLDLSAAAAP
60 70 80 90 100
GGAPAPPPVF AFPTSDALFD CAWSESHESL CAAASGDGSV RLFDVALPPA
110 120 130 140 150
QNPVRLLREH AREVHGLDWN PVRRDAFLSA SWDDTLKLWS PDRPASVRTF
160 170 180 190 200
RGHEYCVYAA AWSARHPDVF ASASGDRTAR VWDVREPAPT LVIPAHDHEV
210 220 230 240 250
LSLDWDKYDP SILATGSVDK SIRVWDVRAP RAPLAQLAGH GYAVKRVKFS
260 270 280 290 300
PHRQGMLMSC SYDMTVCMWD YRKEDALLAR YGHHTEFVAG IDMSVLVEGL
310 320
LASTGWDEMI YVWPFGSDPR AM
Length:322
Mass (Da):35,443
Last modified:June 13, 2012 - v1
Checksum:iEBC6183D9D9CFA01
GO

Genome annotation databases

EnsemblPlantsiORGLA02G0093500.1; ORGLA02G0093500.1; ORGLA02G0093500
GrameneiORGLA02G0093500.1; ORGLA02G0093500.1; ORGLA02G0093500

Similar proteinsi

Entry informationi

Entry nameiI1NYX9_ORYGL
AccessioniPrimary (citable) accession number: I1NYX9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 13, 2012
Last sequence update: June 13, 2012
Last modified: February 28, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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