UniProtKB - H9GHR1 (H9GHR1_ANOCA)
Protein
HMG box domain-containing protein
Gene
HMG20A
Organism
Anolis carolinensis (Green anole) (American chameleon)
Status
Functioni
Regions
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
DNA bindingi | 115 – 183 | HMG boxPROSITE-ProRule annotationAdd BLAST | 69 |
GO - Molecular functioni
- DNA binding Source: UniProtKB-UniRule
- identical protein binding Source: Ensembl
GO - Biological processi
- negative regulation of neuron differentiation Source: Ensembl
- negative regulation of protein sumoylation Source: Ensembl
- negative regulation of transcription by RNA polymerase II Source: Ensembl
- regulation of gene expression Source: GO_Central
Keywordsi
Molecular function | DNA-bindingPROSITE-ProRule annotation |
Names & Taxonomyi
Protein namesi | Recommended name: HMG box domain-containing proteinInterPro annotation |
Gene namesi | Name:HMG20AImported |
Organismi | Anolis carolinensis (Green anole) (American chameleon)Imported |
Taxonomic identifieri | 28377 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Lepidosauria › Squamata › Bifurcata › Unidentata › Episquamata › Toxicofera › Iguania › Dactyloidae › Anolis |
Proteomesi |
|
Subcellular locationi
Nucleus
- nucleus Source: GO_Central
Keywords - Cellular componenti
NucleusPROSITE-ProRule annotationExpressioni
Gene expression databases
Bgeei | ENSACAG00000011520, Expressed in hindlimb bud and 14 other tissues |
Interactioni
GO - Molecular functioni
- identical protein binding Source: Ensembl
Protein-protein interaction databases
STRINGi | 28377.ENSACAP00000011279 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 115 – 183 | HMG boxInterPro annotationAdd BLAST | 69 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 125 | DisorderedSequence analysisAdd BLAST | 125 | |
Regioni | 193 – 233 | DisorderedSequence analysisAdd BLAST | 41 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 165 – 185 | Sequence analysisAdd BLAST | 21 | |
Coiled coili | 251 – 292 | Sequence analysisAdd BLAST | 42 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 46 – 79 | PolarSequence analysisAdd BLAST | 34 | |
Compositional biasi | 80 – 97 | PolyampholyteSequence analysisAdd BLAST | 18 | |
Compositional biasi | 219 – 233 | PolyampholyteSequence analysisAdd BLAST | 15 |
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG0381, Eukaryota |
GeneTreei | ENSGT00940000158464 |
HOGENOMi | CLU_060006_0_0_1 |
InParanoidi | H9GHR1 |
TreeFami | TF106440 |
Family and domain databases
Gene3Di | 1.10.30.10, 1 hit |
InterProi | View protein in InterPro IPR009071, HMG_box_dom IPR036910, HMG_box_dom_sf |
Pfami | View protein in Pfam PF00505, HMG_box, 1 hit |
SMARTi | View protein in SMART SM00398, HMG, 1 hit |
SUPFAMi | SSF47095, SSF47095, 1 hit |
PROSITEi | View protein in PROSITE PS50118, HMG_BOX_2, 1 hit |
i Sequence
Sequence statusi: Complete.
H9GHR1-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MLVKTQGMKR AIMENPMGTS SPPSHFPEDD GSKESNDVVP PGLNHSEGLC
60 70 80 90 100
SSNASQSTNN PDFTEDLVQA QLLRNESSNK AENSEPRPEE EQRTKRGGWS
110 120 130 140 150
KGRKRKKPLR DSNAPKSPLT GYVRFMNERR EQLRAKRPEV PFPEITRMLG
160 170 180 190 200
NEWSKLPPEE KRRYLDEADR DKERYMRELE QYQKTEAYKV FSRKAQARQK
210 220 230 240 250
GKTHRQGIDL YNKNPKEGTR QAAHNHEKET DTKERSVFDI PIFTEEFLNH
260 270 280 290 300
SKAREAELRQ LRKSNMEFEE RNAALQKHVE SMRTAVEKLE VDVIQERSRN
310 320 330 340 350
TVLQQHLETL RQALASTFAG VPLPGSGETP TMDTIDAYMN RLHNIILANP
360
QENENLIVTV REVVNRLER
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAWZ02026435 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSACAT00000011515; ENSACAP00000011279; ENSACAG00000011520 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAWZ02026435 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 28377.ENSACAP00000011279 |
Genome annotation databases
Ensembli | ENSACAT00000011515; ENSACAP00000011279; ENSACAG00000011520 |
Phylogenomic databases
eggNOGi | KOG0381, Eukaryota |
GeneTreei | ENSGT00940000158464 |
HOGENOMi | CLU_060006_0_0_1 |
InParanoidi | H9GHR1 |
TreeFami | TF106440 |
Gene expression databases
Bgeei | ENSACAG00000011520, Expressed in hindlimb bud and 14 other tissues |
Family and domain databases
Gene3Di | 1.10.30.10, 1 hit |
InterProi | View protein in InterPro IPR009071, HMG_box_dom IPR036910, HMG_box_dom_sf |
Pfami | View protein in Pfam PF00505, HMG_box, 1 hit |
SMARTi | View protein in SMART SM00398, HMG, 1 hit |
SUPFAMi | SSF47095, SSF47095, 1 hit |
PROSITEi | View protein in PROSITE PS50118, HMG_BOX_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | H9GHR1_ANOCA | |
Accessioni | H9GHR1Primary (citable) accession number: H9GHR1 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 16, 2012 |
Last sequence update: | June 26, 2013 | |
Last modified: | August 12, 2020 | |
This is version 48 of the entry and version 2 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |