UniProtKB - H9GDJ3 (H9GDJ3_ANOCA)
Protein
Vacuolar protein sorting-associated protein 53 homolog
Gene
VPS53
Organism
Anolis carolinensis (Green anole) (American chameleon)
Status
Functioni
GO - Biological processi
- endocytic recycling Source: Ensembl
- lysosomal transport Source: Ensembl
- retrograde transport, endosome to Golgi Source: GO_Central
Names & Taxonomyi
Protein namesi | Recommended name: Vacuolar protein sorting-associated protein 53 homologARBA annotation |
Gene namesi | Name:VPS53Imported |
Organismi | Anolis carolinensis (Green anole) (American chameleon)Imported |
Taxonomic identifieri | 28377 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Lepidosauria › Squamata › Bifurcata › Unidentata › Episquamata › Toxicofera › Iguania › Dactyloidae › Anolis |
Proteomesi |
|
Subcellular locationi
Golgi apparatus
- trans-Golgi network membrane ARBA annotation; Peripheral membrane protein ARBA annotation
Endosome
- Endosome membrane ARBA annotation; Peripheral membrane protein ARBA annotation
Other locations
- Membrane ARBA annotation; Peripheral membrane protein ARBA annotation
Cytosol
- cytosol Source: GOC
Endosome
- EARP complex Source: Ensembl
- endosome membrane Source: UniProtKB-SubCell
Golgi apparatus
- GARP complex Source: GO_Central
Other locations
- perinuclear region of cytoplasm Source: Ensembl
Keywords - Cellular componenti
EndosomeARBA annotation, Golgi apparatusARBA annotation, MembraneARBA annotationExpressioni
Gene expression databases
Bgeei | ENSACAG00000008030, Expressed in brain and 14 other tissues |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 40 – 452 | Vps53_NInterPro annotationAdd BLAST | 413 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 383 – 415 | DisorderedSequence analysisAdd BLAST | 33 | |
Regioni | 795 – 820 | DisorderedSequence analysisAdd BLAST | 26 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 97 – 138 | Sequence analysisAdd BLAST | 42 | |
Coiled coili | 197 – 217 | Sequence analysisAdd BLAST | 21 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 395 – 413 | PolyampholyteSequence analysisAdd BLAST | 19 | |
Compositional biasi | 803 – 817 | PolarSequence analysisAdd BLAST | 15 |
Sequence similaritiesi
Belongs to the VPS53 family.ARBA annotation
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG2180, Eukaryota |
GeneTreei | ENSGT00390000015165 |
HOGENOMi | CLU_007339_0_0_1 |
InParanoidi | H9GDJ3 |
OMAi | YRQVFRG |
TreeFami | TF106150 |
Family and domain databases
InterProi | View protein in InterPro IPR039766, Vps53 IPR007234, Vps53_N |
PANTHERi | PTHR12820, PTHR12820, 1 hit |
Pfami | View protein in Pfam PF04100, Vps53_N, 1 hit |
i Sequence
Sequence statusi: Complete.
H9GDJ3-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
AMEDDELDLA DDLEDALQLA PEVQLAIEQV FPSQDPLDRA DFNAVEYINT
60 70 80 90 100
LFPTEQSLAN IDDVVNKIKL KIRRLDDNIR TVVRGQTNVG QDGREALEEA
110 120 130 140 150
QKAIQQLFGK IKDIKDKAEK SEQMVKEITR DIKQLDHAKR HLTTSITTLN
160 170 180 190 200
HLHMLAGGVD SLEAMTRRRQ YGEVANLLQG VVNVLEHFNK YMGIPQIRQL
210 220 230 240 250
SERVKAAQNE LGQQILADFE EAFPSQGTKR AGGASNVLRD ACLVANVLDP
260 270 280 290 300
RIKQEIIKKF IKQHLSEYLV LFQENQDVAW LDKIDRRYAW IKRQFVDYEE
310 320 330 340 350
KYGRMFPPEW CMTERIAVDF CHITRTELAK IMRTRAREIE VKLLLFAIQR
360 370 380 390 400
TTNFEGFLAK RFSGCTLSDT IVKKVESPLA STNPFLEDDT SPEADDVTSE
410 420 430 440 450
KSDIDKPKKP KAPDNPFHGI ISKCFEPHLY VYIESQDKNL SELIDRFVGD
460 470 480 490 500
FKAQGPPKPN VDEGGAVLPS CADLFVYYKK CMVQCSQLST GEPMIALTTI
510 520 530 540 550
FQKYLREYAW KILSGNLPKT SSGGGGLTIT SLLKEKEGSE VAKFTLEELC
560 570 580 590 600
LICSILSTAE YCLATTQQLE EKLKEKVDTS LVERINLMGE MDTFSIVISN
610 620 630 640 650
SIQLLVQDLD AACDPALTAM SKMQWQNVEH VGDQSPYVTS VILHIKQNVP
660 670 680 690 700
IIRDNLASTR KYFTQFCIKF ANSFIPKFIN HLFKCKPISM VGAEQLLLDT
710 720 730 740 750
HSLKMVLLDL PSIGSQVVRK APASYTKIVV KGMTRAEMIL KVVMAPHEPA
760 770 780 790 800
IVFVDNYIKL LADCSTDTFQ KILDMKGLKR SEQSAMLELF RQRLPAPPSG
810 820 830
PESASFVSLT APTPEQESSR IRKLEKLIKK RL
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAWZ02029996 Genomic DNA No translation available. AAWZ02029997 Genomic DNA No translation available. AAWZ02029998 Genomic DNA No translation available. AAWZ02029999 Genomic DNA No translation available. |
Genome annotation databases
Ensembli | ENSACAT00000008161; ENSACAP00000007990; ENSACAG00000008030 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAWZ02029996 Genomic DNA No translation available. AAWZ02029997 Genomic DNA No translation available. AAWZ02029998 Genomic DNA No translation available. AAWZ02029999 Genomic DNA No translation available. |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 28377.ENSACAP00000007990 |
Genome annotation databases
Ensembli | ENSACAT00000008161; ENSACAP00000007990; ENSACAG00000008030 |
Phylogenomic databases
eggNOGi | KOG2180, Eukaryota |
GeneTreei | ENSGT00390000015165 |
HOGENOMi | CLU_007339_0_0_1 |
InParanoidi | H9GDJ3 |
OMAi | YRQVFRG |
TreeFami | TF106150 |
Gene expression databases
Bgeei | ENSACAG00000008030, Expressed in brain and 14 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR039766, Vps53 IPR007234, Vps53_N |
PANTHERi | PTHR12820, PTHR12820, 1 hit |
Pfami | View protein in Pfam PF04100, Vps53_N, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | H9GDJ3_ANOCA | |
Accessioni | H9GDJ3Primary (citable) accession number: H9GDJ3 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 16, 2012 |
Last sequence update: | May 16, 2012 | |
Last modified: | October 7, 2020 | |
This is version 45 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |