UniProtKB - H9G770 (H9G770_ANOCA)
Protein
Pre-mRNA-splicing factor SLU7
Gene
SLU7
Organism
Anolis carolinensis (Green anole) (American chameleon)
Status
Functioni
Involved in pre-mRNA splicing.UniRule annotation
GO - Molecular functioni
- pre-mRNA 3'-splice site binding Source: UniProtKB-UniRule
- second spliceosomal transesterification activity Source: UniProtKB-UniRule
- zinc ion binding Source: Ensembl
GO - Biological processi
- alternative mRNA splicing, via spliceosome Source: Ensembl
- cellular response to heat Source: Ensembl
- intracellular protein transport Source: Ensembl
- mRNA 3'-splice site recognition Source: Ensembl
- RNA splicing Source: GO_Central
Keywordsi
Biological process | mRNA processing, mRNA splicing |
Names & Taxonomyi
Protein namesi | Recommended name: Pre-mRNA-splicing factor SLU7UniRule annotationARBA annotation |
Gene namesi | Name:SLU7Imported |
Organismi | Anolis carolinensis (Green anole) (American chameleon)Imported |
Taxonomic identifieri | 28377 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Lepidosauria › Squamata › Bifurcata › Unidentata › Episquamata › Toxicofera › Iguania › Dactyloidae › Anolis |
Proteomesi |
|
Subcellular locationi
Nucleus
- Nucleus UniRule annotationARBA annotation
Cytosol
- cytosol Source: Ensembl
Nucleus
- catalytic step 2 spliceosome Source: Ensembl
- nuclear speck Source: Ensembl
- small nuclear ribonucleoprotein complex Source: Ensembl
- spliceosomal complex Source: GO_Central
Keywords - Cellular componenti
NucleusUniRule annotationARBA annotation, SpliceosomeUniRule annotationARBA annotationExpressioni
Gene expression databases
Bgeei | ENSACAG00000003144, Expressed in testis and 14 other tissues |
Interactioni
Subunit structurei
Associated with the spliceosome.
UniRule annotationProtein-protein interaction databases
STRINGi | 28377.ENSACAP00000003118 |
Family & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 161 – 433 | Slu7InterPro annotationAdd BLAST | 273 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 92 | DisorderedSequence analysisAdd BLAST | 92 | |
Regioni | 205 – 253 | DisorderedSequence analysisAdd BLAST | 49 | |
Regioni | 491 – 587 | DisorderedSequence analysisAdd BLAST | 97 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 15 | PolarSequence analysisAdd BLAST | 15 | |
Compositional biasi | 23 – 59 | PolyampholyteSequence analysisAdd BLAST | 37 | |
Compositional biasi | 213 – 253 | PolyampholyteSequence analysisAdd BLAST | 41 | |
Compositional biasi | 495 – 509 | BasicSequence analysisAdd BLAST | 15 | |
Compositional biasi | 510 – 575 | PolyampholyteSequence analysisAdd BLAST | 66 |
Sequence similaritiesi
Phylogenomic databases
eggNOGi | KOG2560, Eukaryota |
GeneTreei | ENSGT00390000002292 |
HOGENOMi | CLU_019317_2_0_1 |
InParanoidi | H9G770 |
OMAi | ACCHSFI |
OrthoDBi | 816947at2759 |
TreeFami | TF105691 |
Family and domain databases
InterProi | View protein in InterPro IPR021715, Slu7_dom IPR039974, Splicing_factor_SLU7 |
PANTHERi | PTHR12942, PTHR12942, 1 hit |
Pfami | View protein in Pfam PF11708, Slu7, 1 hit |
i Sequence
Sequence statusi: Complete.
H9G770-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MESGSMETIA TNPPGGGSNG LEEPKKMTRE DWRKKKELEE QRKLGNAPAE
60 70 80 90 100
VDEEGKDINP HIPQYISSVP WYIDPSKRPT LKHQRPQPEK QQEFTFLGEW
110 120 130 140 150
YKRGVKENSV ATKYRKGACE NCGALTHKKK DCLERPRRVG AKYTGTNIAP
160 170 180 190 200
DEHEQPQLMF DYDGKRDRWN GYNPEEHMKI VEEYAKVDLA KRTLKAQKLQ
210 220 230 240 250
EELASGKLTE QVSSPRHRWD EEEPNSQTER DHNSEGEDED KYADDIDMPG
260 270 280 290 300
QNFDSKRRIT VRNLRIREDT AKYLRNLDPN SAYYDPKTRA MRENPYANAG
310 320 330 340 350
KNPDEVSYAG DNFVRYSGAT ISMAQTQLFA WEAYEKGSEV HLQADPTKLE
360 370 380 390 400
LLYKSFKVKK EDFKEQQKES ILEKYGGEEH LDAPPPELLL AQTEDYVEYS
410 420 430 440 450
RHGTVIKGQD KAVARSKYEE DVLINNHTCI WGSYWKEGKW GYKCCYSFVK
460 470 480 490 500
YSYCTGEAGK ELANADEELP HDLPEDGYMA IPKTLVEIHQ EKQKEEKKKK
510 520 530 540 550
KKKKHKHKKS TSSDSEGEER KKQEKLKKAL NAEEARLLHV KEIMQLDERK
560 570 580
RPYNSMYESR EPTEEEMEAY QMKRQRPDDP MASFLGQ
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAWZ02023438 Genomic DNA No translation available. |
RefSeqi | XP_003225251.1, XM_003225203.2 |
Genome annotation databases
Ensembli | ENSACAT00000003197; ENSACAP00000003118; ENSACAG00000003144 |
GeneIDi | 100556990 |
KEGGi | acs:100556990 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AAWZ02023438 Genomic DNA No translation available. |
RefSeqi | XP_003225251.1, XM_003225203.2 |
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 28377.ENSACAP00000003118 |
Genome annotation databases
Ensembli | ENSACAT00000003197; ENSACAP00000003118; ENSACAG00000003144 |
GeneIDi | 100556990 |
KEGGi | acs:100556990 |
Organism-specific databases
CTDi | 10569 |
Phylogenomic databases
eggNOGi | KOG2560, Eukaryota |
GeneTreei | ENSGT00390000002292 |
HOGENOMi | CLU_019317_2_0_1 |
InParanoidi | H9G770 |
OMAi | ACCHSFI |
OrthoDBi | 816947at2759 |
TreeFami | TF105691 |
Gene expression databases
Bgeei | ENSACAG00000003144, Expressed in testis and 14 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR021715, Slu7_dom IPR039974, Splicing_factor_SLU7 |
PANTHERi | PTHR12942, PTHR12942, 1 hit |
Pfami | View protein in Pfam PF11708, Slu7, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | H9G770_ANOCA | |
Accessioni | H9G770Primary (citable) accession number: H9G770 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | May 16, 2012 |
Last sequence update: | May 16, 2012 | |
Last modified: | December 2, 2020 | |
This is version 54 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |