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Protein
Submitted name:

Brain and muscle Arnt-like protein 2 variant d

Gene

Bmal2

Organism
Rattus norvegicus (Rat)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

Keywordsi

Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Brain and muscle Arnt-like protein 2 variant dImported
Gene namesi
Name:Bmal2Imported
OrganismiRattus norvegicus (Rat)Imported
Taxonomic identifieri10116 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaMyomorphaMuroideaMuridaeMurinaeRattus

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusSAAS annotation

Interactioni

GO - Molecular functioni

Structurei

3D structure databases

ProteinModelPortaliH9CTG8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini48 – 101BHLHInterPro annotationAdd BLAST54
Domaini119 – 184PASInterPro annotationAdd BLAST66
Domaini319 – 368PASInterPro annotationAdd BLAST50

Keywords - Domaini

RepeatSAAS annotation

Family and domain databases

CDDicd00083 HLH, 1 hit
cd00130 PAS, 2 hits
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR001067 Nuc_translocat
IPR000014 PAS
IPR035965 PAS-like_dom_sf
IPR013767 PAS_fold
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF00989 PAS, 1 hit
PRINTSiPR00785 NCTRNSLOCATR
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00091 PAS, 2 hits
SUPFAMiSSF47459 SSF47459, 1 hit
SSF55785 SSF55785, 2 hits
TIGRFAMsiTIGR00229 sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS50112 PAS, 2 hits

Sequencei

Sequence statusi: Complete.

H9CTG8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEFPRKRRRS DSELLQSEFR TDAMVENLPR SPFTSVLSTR TGVAVPNGIR
60 70 80 90 100
EAHSQTEKRR RDKMNHLIWK LSSMIPPHIP TAHKLDKLSV LRRAVQYLRS
110 120 130 140 150
QRGMTEFYLG ENAKPSFIQD KELSHLILKA AEGFLLVVGC EGGRILFVSK
160 170 180 190 200
SVSKTLHYDQ ASLMGQNLFD FLHPKDVAKV KEQLSCDVSL REKPIGTKTS
210 220 230 240 250
PQVHSHSHIG RSRVHSGSRR SFFFRMKSSC TVPVKEEQRC SSCSKKKDQR
260 270 280 290 300
KFHTIHCTGY LRSWPPNVVG TEKEMGSGKD SGPLTCLVAM GRLQPYTVPP
310 320 330 340 350
KNGKINVRPA EFITRFAMNG KFVYVDQRAT AILGYLPQEL LGTSCYEYFH
360 370 380 390 400
QDDHSNLSDK HKAVLQSKEK ILTDSYKFRV KDGSFVTLKS KWFSFTNPWT
410 420 430 440 450
KKLEYIVSVN TLVLGRSETA VSVPQCRSSQ SSEDSFRQPC VSVPGISTGT
460 470 480 490 500
LLGTGSIGTD IANEVLSLQR SHSSSPEDAN PSGVVRDKHS VNFGSAPVPV
510 520 530 540 550
STGELFALSP ETEGLEAARQ HQSSEPAHCH KPLLSDSTQL GFDALCDSDD
560 570
TAMATFMNYL EAEGGLGDPG DFSDIQWTL
Length:579
Mass (Da):64,506
Last modified:May 16, 2012 - v1
Checksum:iC41BD656D9038617
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JQ361086 mRNA Translation: AFC93435.1
UniGeneiRn.41612

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JQ361086 mRNA Translation: AFC93435.1
UniGeneiRn.41612

3D structure databases

ProteinModelPortaliH9CTG8
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

CDDicd00083 HLH, 1 hit
cd00130 PAS, 2 hits
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR001067 Nuc_translocat
IPR000014 PAS
IPR035965 PAS-like_dom_sf
IPR013767 PAS_fold
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF00989 PAS, 1 hit
PRINTSiPR00785 NCTRNSLOCATR
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SM00091 PAS, 2 hits
SUPFAMiSSF47459 SSF47459, 1 hit
SSF55785 SSF55785, 2 hits
TIGRFAMsiTIGR00229 sensory_box, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
PS50112 PAS, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiH9CTG8_RAT
AccessioniPrimary (citable) accession number: H9CTG8
Entry historyiIntegrated into UniProtKB/TrEMBL: May 16, 2012
Last sequence update: May 16, 2012
Last modified: November 7, 2018
This is version 40 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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