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Protein
Submitted name:

Leukocyte-specific transcript 1 protein

Gene

LST1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Leukocyte-specific transcript 1 proteinImported
Gene namesi
Name:LST1Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 6

Organism-specific databases

EuPathDBiHostDB:ENSG00000204482.10
HGNCiHGNC:14189 LST1

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 29HelicalSequence analysisAdd BLAST24

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000204482

Expressioni

Gene expression databases

BgeeiENSG00000204482 Expressed in 194 organ(s), highest expression level in leukocyte
ExpressionAtlasiH7C4Z3 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH7C4Z3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

GeneTreeiENSGT00730000112003

Family and domain databases

InterProiView protein in InterPro
IPR007775 Leukocyte-sp_tscrpt_1_LST1
PfamiView protein in Pfam
PF05083 LST1, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 10 potential isoforms that are computationally mapped.Show allAlign All

H7C4Z3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XDICIYGGLG LGGLLLLAVV LLSACLCWLH RREAGEELGP GLLRAGTPLC
60
ISAEAASAQQ
Length:60
Mass (Da):6,145
Last modified:April 18, 2012 - v1
Checksum:i29B09AF5E13C606F
GO

Computationally mapped potential isoform sequencesi

There are 10 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
O00453LST1_HUMAN
Leukocyte-specific transcript 1 pro...
LST1 B144
97Annotation score:
H7C4M3H7C4M3_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
35Annotation score:
F2Z2M1F2Z2M1_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
66Annotation score:
Q2HNT4Q2HNT4_HUMAN
LST1/O
LST1
44Annotation score:
Q5HYT5Q5HYT5_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
36Annotation score:
A0A024RCL9A0A024RCL9_HUMAN
Leukocyte specific transcript 1, is...
LST1 hCG_43689
82Annotation score:
A0A0G2JIN5A0A0G2JIN5_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
46Annotation score:
A0A0G2JHS1A0A0G2JHS1_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
43Annotation score:
Q5STB1Q5STB1_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
28Annotation score:
A0A0G2JIG4A0A0G2JIG4_HUMAN
Leukocyte-specific transcript 1 pro...
LST1
43Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662801 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000490742; ENSP00000418578; ENSG00000204482
UCSCiuc063ncl.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL662801 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH7C4Z3
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000490742; ENSP00000418578; ENSG00000204482
UCSCiuc063ncl.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000204482.10
HGNCiHGNC:14189 LST1
OpenTargetsiENSG00000204482
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00730000112003

Miscellaneous databases

ChiTaRSiLST1 human

Gene expression databases

BgeeiENSG00000204482 Expressed in 194 organ(s), highest expression level in leukocyte
ExpressionAtlasiH7C4Z3 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR007775 Leukocyte-sp_tscrpt_1_LST1
PfamiView protein in Pfam
PF05083 LST1, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH7C4Z3_HUMAN
AccessioniPrimary (citable) accession number: H7C4Z3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 12, 2018
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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