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Protein
Submitted name:

Synaptophysin

Gene

SYP

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SynaptophysinImported
Gene namesi
Name:SYPImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome X

Organism-specific databases

EuPathDBiHostDB:ENSG00000102003.10
HGNCiHGNC:11506 SYP

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei33 – 51HelicalSequence analysisAdd BLAST19
Transmembranei91 – 113HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000102003

PTM / Processingi

Proteomic databases

MaxQBiH7C4W3
PeptideAtlasiH7C4W3
PRIDEiH7C4W3

Expressioni

Gene expression databases

BgeeiENSG00000102003
ExpressionAtlasiH7C4W3 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH7C4W3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 117MARVELInterPro annotationAdd BLAST117

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiENOG410IDYC Eukaryota
ENOG4111J4N LUCA
GeneTreeiENSGT00390000010039

Family and domain databases

InterProiView protein in InterPro
IPR008253 Marvel
IPR001285 Synaptophysin/porin
IPR028714 SYP
PANTHERiPTHR10306 PTHR10306, 2 hits
PTHR10306:SF10 PTHR10306:SF10, 2 hits
PfamiView protein in Pfam
PF01284 MARVEL, 1 hit
PRINTSiPR00220 SYNAPTOPHYSN
PROSITEiView protein in PROSITE
PS51225 MARVEL, 1 hit

Sequencei

Sequence statusi: Fragment.

H7C4W3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
XADMDVVNQL VAGGQFRVVK EPLGFVKVLQ WDFLATAVFA FMWLVSSSAW
60 70 80 90 100
AKGLSDVKMA TDPENIIKEM PVCRQTGNTC KELRDPVTSG LNTSVVFGFL
110 120 130 140 150
NLVLWVGNLW FVFKETGWAA PFLRAPPGAP EKQPAPGDAY GDAGYGQGPG
160 170 180 190 200
GYGPQDSYGP QGGYQPDYGQ PAGSGGSGYG PQGDYGQQGY GPQGAPTSFS

NQM
Length:203
Mass (Da):21,539
Last modified:April 18, 2012 - v1
Checksum:i6CAD0F786D688B27
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC232271 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000472598; ENSP00000418387; ENSG00000102003
UCSCiuc064zfb.1 human

Similar proteinsi

Entry informationi

Entry nameiH7C4W3_HUMAN
AccessioniPrimary (citable) accession number: H7C4W3
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: May 23, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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