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Protein
Submitted name:

Uncharacterized protein

Gene

WBGene00105702

Organism
Pristionchus pacificus (Parasitic nematode)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:WBGene00105702Imported
OrganismiPristionchus pacificus (Parasitic nematode)Imported
Taxonomic identifieri54126 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaDiplogasteridaNeodiplogasteridaePristionchus
Proteomesi
  • UP000005239 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei44 – 61HelicalSequence analysisAdd BLAST18
Transmembranei73 – 92HelicalSequence analysisAdd BLAST20
Transmembranei146 – 169HelicalSequence analysisAdd BLAST24
Transmembranei189 – 210HelicalSequence analysisAdd BLAST22
Transmembranei304 – 324HelicalSequence analysisAdd BLAST21
Transmembranei330 – 349HelicalSequence analysisAdd BLAST20

Keywords - Cellular componenti

Membrane

Interactioni

Protein-protein interaction databases

STRINGi54126.PPA16148

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG1287 Eukaryota
COG0531 LUCA
InParanoidiH3F217
OMAiYINSKME
OrthoDBiEOG091G06LG

Family and domain databases

InterProiView protein in InterPro
IPR002293 AA/rel_permease1
PfamiView protein in Pfam
PF13520 AA_permease_2, 1 hit
PIRSFiPIRSF006060 AA_transporter, 1 hit

Sequencei

Sequence statusi: Complete.

H3F217-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MCTGCIIIYP ATLAIQADTF SEYVFKGINI TMENDTQLFF AKKLTGFSLI
60 70 80 90 100
WFLLFLNFFS LKTFVSRFQI VASIAKIAAT ALVIGTGLYY LFFKGWTENI
110 120 130 140 150
QDPFGNSTFA VGTFVSALFS GLYSYDGWDI LNFGAEEIDN PKRTMPLAIV
160 170 180 190 200
FGMSFIAILY LFVNFSYFIV IPIPDMLASP AVAQTFGDLT LGSFSFIIPV
210 220 230 240 250
FVALLLIGSL NSTMFSASRY LQAAAKQGHL PSCISCINPI SDSPRVALLV
260 270 280 290 300
HVILAMGISF AGDLNQLINY VSFSQWSQRG CTMAALIYIR FTHKPVHPER
310 320 330 340 350
IRTFILMPLL FCLICWTLVV VTIVDSFDVS VVGIGIVLAG FVFFFLFIFE
360 370 380 390 400
KSLPSIPAYR DNSRKLNEMV TIWSQIIFNV MPELDFGEEE DNDLHKVYPE
410 420 430
VPPLEGSISC EDGVKRRVSA LSCSTQSTDS STRF
Length:434
Mass (Da):48,353
Last modified:April 18, 2012 - v1
Checksum:iE75F5FC56090435F
GO

Genome annotation databases

EnsemblMetazoaiPPA16148; PPA16148; PPA16148

Similar proteinsi

Entry informationi

Entry nameiH3F217_PRIPA
AccessioniPrimary (citable) accession number: H3F217
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: February 28, 2018
This is version 31 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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