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Protein
Submitted name:

T-box transcription factor Tb

Gene
N/A
Organism
Tetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T-box transcription factor TbImported
OrganismiTetraodon nigroviridis (Spotted green pufferfish) (Chelonodon nigroviridis)Imported
Taxonomic identifieri99883 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTetraodon
Proteomesi
  • UP000007303 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi99883.ENSTNIP00000019718

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585 Eukaryota
ENOG410XSTS LUCA
GeneTreeiENSGT00900000140847
InParanoidiH3DGS4
OMAiAPSCVYI
OrthoDBiEOG091G05OC
TreeFamiTF106341

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

H3DGS4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
LDRMATDECT GKVSHYRVDH LLHAVESELE AGSEKGDPTE KELTVSLDEI
60 70 80 90 100
ELWQKFKTLT NEMIVTKNGR RMFPVLKINV SGLDPNMYSI LLDFVSADNH
110 120 130 140 150
RWKYVNGEWV PGGKPEPQTP SCVYIHPDSP NFGAHWMKAA VSFNKVKLTN
160 170 180 190 200
KLNGGGQVML NSLHKYEPRI HIVRVGVTRK MITSHSFPET QFIAVTAYQN
210 220 230 240 250
DEITALKIKH NPFAKAFLDA KERKDIKDIK EDTSENQQSS YAHWPVGAWF
260 270 280 290 300
MPPSTPHSQF GSPLSLSPSP GCERYSTLRS HRSAPYTSPY AHRNNSPIGY
310 320 330 340 350
SDNSSACLLP SHDNWSGLHV PTHSSMMSMA HNSSSATNSS QYTGLWSVNN
360 370 380 390 400
SPLPPGSQNG TTVSPQVLRG CSSQYPGLSY SMAVPSCGSP MYESSASTDV
410 420 430
HDGAPFDASP QGGLPPLWTS CDASTPLTET SL
Length:432
Mass (Da):47,542
Last modified:April 18, 2012 - v1
Checksum:i125090B553E04F76
GO

Genome annotation databases

EnsembliENSTNIT00000019948; ENSTNIP00000019718; ENSTNIG00000016613

Similar proteinsi

Entry informationi

Entry nameiH3DGS4_TETNG
AccessioniPrimary (citable) accession number: H3DGS4
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: June 20, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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