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Protein

Secretory carrier-associated membrane protein

Gene

SCAMP2

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.UniRule annotation

GO - Biological processi

Keywordsi

Biological processTransportUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Secretory carrier-associated membrane proteinUniRule annotation
Short name:
Secretory carrier membrane proteinUniRule annotation
Gene namesi
Name:SCAMP2Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 15

Organism-specific databases

EuPathDBiHostDB:ENSG00000140497.16
HGNCiHGNC:10564 SCAMP2

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei129 – 151HelicalUniRule annotationAdd BLAST23
Transmembranei163 – 180HelicalUniRule annotationAdd BLAST18

Keywords - Cellular componenti

Membrane

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000140497

PTM / Processingi

Proteomic databases

MaxQBiH3BV04
PeptideAtlasiH3BV04
PRIDEiH3BV04

Expressioni

Gene expression databases

BgeeiENSG00000140497
ExpressionAtlasiH3BV04 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH3BV04
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili59 – 96Sequence analysisAdd BLAST38

Sequence similaritiesi

Belongs to the SCAMP family.UniRule annotation

Keywords - Domaini

Coiled coilSequence analysis, Transmembrane, Transmembrane helixUniRule annotation

Phylogenomic databases

GeneTreeiENSGT00390000014393

Family and domain databases

InterProiView protein in InterPro
IPR007273 SCAMP
PANTHERiPTHR10687 PTHR10687, 1 hit
PfamiView protein in Pfam
PF04144 SCAMP, 1 hit

Sequencei

Sequence statusi: Fragment.

H3BV04-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSAFDTNPFA DPVDVNPFQT NAATTVPVTQ LPGSSQPAVL QPSVEPTQPT
60 70 80 90 100
PQAVVSAAQA GLLRQQEELD RKAAELERKE RELQNTVANL HVRQNNWPPL
110 120 130 140 150
PSWCPVKPCF YQDFSTEIPA DYQRICKMLY YLWMLHSVTL FLNLLACLAW
160 170 180 190
FSGNSSKGVD FGLSILWFLI FTPCAFLCWY RPIYKAFRSD NSFS
Length:194
Mass (Da):21,984
Last modified:April 18, 2012 - v1
Checksum:iEAD274FBD75D67B8
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei194Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091230 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000562363; ENSP00000457890; ENSG00000140497
UCSCiuc059lms.1 human

Similar proteinsi

Entry informationi

Entry nameiH3BV04_HUMAN
AccessioniPrimary (citable) accession number: H3BV04
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: July 18, 2018
This is version 33 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

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