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Protein
Submitted name:

Trinucleotide repeat-containing gene 6A protein

Gene

TNRC6A

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Trinucleotide repeat-containing gene 6A proteinImported
Gene namesi
Name:TNRC6AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000090905.17
HGNCiHGNC:11969 TNRC6A

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000090905

PTM / Processingi

Proteomic databases

MaxQBiH3BTQ1
PeptideAtlasiH3BTQ1
PRIDEiH3BTQ1

Expressioni

Gene expression databases

BgeeiENSG00000090905 Expressed in 205 organ(s), highest expression level in cerebellar vermis
ExpressionAtlasiH3BTQ1 baseline and differential

Structurei

3D structure databases

ProteinModelPortaliH3BTQ1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00410000025966

Family and domain databases

InterProiView protein in InterPro
IPR033501 TNRC6A
PANTHERiPTHR13020:SF28 PTHR13020:SF28, 2 hits

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

H3BTQ1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
XQDGIVADES QNMQFMSSQS MKLPPSNSAL PNQALGSIAG LGMQNLNSVR
60 70 80 90 100
QNGNPSMFGV GNTAAQPRGM QQPPAQPLSS SQPNLRAQVP PPLLSPQVAM
110 120 130 140 150
LNQLSQLNQL SQISQLQRLL AQQQRAQSQR SVPSGNRPQQ DQQGRPLSVQ
160 170 180 190 200
QQMMQQSRQL DPNLLVKQQT PPSQQQPLHQ PAMKSFLDNV MPHTTPELQK

GPS
Length:203
Mass (Da):22,159
Last modified:April 18, 2012 - v1
Checksum:i3228B4C5F4FDA3BE
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q8NDV7TNR6A_HUMAN
Trinucleotide repeat-containing gen...
TNRC6A CAGH26, KIAA1460, TNRC6
1,962Annotation score:
H7C269H7C269_HUMAN
Trinucleotide repeat-containing gen...
TNRC6A
906Annotation score:
H3BRT3H3BRT3_HUMAN
Trinucleotide repeat-containing gen...
TNRC6A
160Annotation score:
I3L218I3L218_HUMAN
Trinucleotide repeat-containing gen...
TNRC6A
96Annotation score:
I3L3S5I3L3S5_HUMAN
Trinucleotide repeat-containing gen...
TNRC6A
40Annotation score:

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei203Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002565 Genomic DNA No translation available.
AC008731 Genomic DNA No translation available.
AC010321 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000568750; ENSP00000457273; ENSG00000090905
UCSCiuc059sfs.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC002565 Genomic DNA No translation available.
AC008731 Genomic DNA No translation available.
AC010321 Genomic DNA No translation available.

3D structure databases

ProteinModelPortaliH3BTQ1
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH3BTQ1
PeptideAtlasiH3BTQ1
PRIDEiH3BTQ1

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000568750; ENSP00000457273; ENSG00000090905
UCSCiuc059sfs.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000090905.17
HGNCiHGNC:11969 TNRC6A
OpenTargetsiENSG00000090905
GenAtlasiSearch...

Phylogenomic databases

GeneTreeiENSGT00410000025966

Miscellaneous databases

ChiTaRSiTNRC6A human

Gene expression databases

BgeeiENSG00000090905 Expressed in 205 organ(s), highest expression level in cerebellar vermis
ExpressionAtlasiH3BTQ1 baseline and differential

Family and domain databases

InterProiView protein in InterPro
IPR033501 TNRC6A
PANTHERiPTHR13020:SF28 PTHR13020:SF28, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiH3BTQ1_HUMAN
AccessioniPrimary (citable) accession number: H3BTQ1
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 12, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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