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Protein
Submitted name:

RNA pseudouridylate synthase domain containing 1, isoform CRA_b

Gene

RPUSD1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RNA pseudouridylate synthase domain containing 1, isoform CRA_bImported
Submitted name:
RNA pseudouridylate synthase domain-containing protein 1Imported
Gene namesi
Name:RPUSD1Imported
ORF Names:hCG_1984148Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 16

Organism-specific databases

EuPathDBiHostDB:ENSG00000007376.7
HGNCiHGNC:14173 RPUSD1

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000007376

PTM / Processingi

Proteomic databases

PeptideAtlasiH3BQN8
PRIDEiH3BQN8

Expressioni

Gene expression databases

BgeeiENSG00000007376 Expressed in 158 organ(s), highest expression level in anterior cingulate cortex
ExpressionAtlasiH3BQN8 baseline and differential

Structurei

3D structure databases

SMRiH3BQN8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 53PseudoU_synth_2InterPro annotationAdd BLAST42

Phylogenomic databases

eggNOGiKOG1919 Eukaryota
COG0564 LUCA
GeneTreeiENSGT00510000048339

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006145 PsdUridine_synth_RsuA/RluD
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 8 potential isoforms that are computationally mapped.Show allAlign All

H3BQN8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MCIEGSQGCE NPKPSLTDLV VLEHGLYAGD PVSKVLLKPL TGRTHQLRVH
60 70 80 90 100
CSALGHPVVG DLTYGEVSGR EDRPFRMMLH AFYLRIPTDT ECVEVCTPDP
110 120 130 140 150
FLPSLDACWS PHTLLQSLDQ LVQALRATPD PDPEDRGPRP GSPSALLPGP
160 170 180
GRPPPPPTKP PETEAQRGPC LQWLSEWTLE PDS
Length:183
Mass (Da):19,996
Last modified:April 18, 2012 - v1
Checksum:i8898F7496D0CC84F
GO

Computationally mapped potential isoform sequencesi

There are 8 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q9UJJ7RUSD1_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1 C16orf40, RLUCL
312Annotation score:
H3BUN6H3BUN6_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
131Annotation score:
H3BVD0H3BVD0_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
178Annotation score:
H3BU91H3BU91_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
141Annotation score:
H3BSG4H3BSG4_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
173Annotation score:
H3BMZ6H3BMZ6_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
181Annotation score:
H3BRG3H3BRG3_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
168Annotation score:
H3BS55H3BS55_HUMAN
RNA pseudouridylate synthase domain...
RPUSD1
97Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL031033 Genomic DNA No translation available.
CH471112 Genomic DNA Translation: EAW85714.1
RefSeqiNP_001311341.1, NM_001324412.1
NP_001311342.1, NM_001324413.1
NP_001311343.1, NM_001324414.1
NP_001311344.1, NM_001324415.1
UniGeneiHs.101742

Genome annotation databases

EnsembliENST00000567114; ENSP00000455862; ENSG00000007376
GeneIDi113000
UCSCiuc059osd.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL031033 Genomic DNA No translation available.
CH471112 Genomic DNA Translation: EAW85714.1
RefSeqiNP_001311341.1, NM_001324412.1
NP_001311342.1, NM_001324413.1
NP_001311343.1, NM_001324414.1
NP_001311344.1, NM_001324415.1
UniGeneiHs.101742

3D structure databases

SMRiH3BQN8
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PeptideAtlasiH3BQN8
PRIDEiH3BQN8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000567114; ENSP00000455862; ENSG00000007376
GeneIDi113000
UCSCiuc059osd.1 human

Organism-specific databases

CTDi113000
EuPathDBiHostDB:ENSG00000007376.7
HGNCiHGNC:14173 RPUSD1
OpenTargetsiENSG00000007376
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1919 Eukaryota
COG0564 LUCA
GeneTreeiENSGT00510000048339

Miscellaneous databases

ChiTaRSiRPUSD1 human

Gene expression databases

BgeeiENSG00000007376 Expressed in 158 organ(s), highest expression level in anterior cingulate cortex
ExpressionAtlasiH3BQN8 baseline and differential

Family and domain databases

CDDicd02869 PseudoU_synth_RluCD_like, 1 hit
InterProiView protein in InterPro
IPR020103 PsdUridine_synth_cat_dom_sf
IPR006145 PsdUridine_synth_RsuA/RluD
PfamiView protein in Pfam
PF00849 PseudoU_synth_2, 1 hit
SUPFAMiSSF55120 SSF55120, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH3BQN8_HUMAN
AccessioniPrimary (citable) accession number: H3BQN8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 12, 2018
This is version 54 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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