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Protein

Small lysine-rich protein 1

Gene

SMKR1

Organism
Homo sapiens (Human)
Status
Reviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Recommended name:
Small lysine-rich protein 1
Gene namesi
Name:SMKR1
OrganismiHomo sapiens (Human)
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 7

Organism-specific databases

EuPathDBiHostDB:ENSG00000240204.2
HGNCiHGNC:43561 SMKR1
neXtProtiNX_H3BMG3

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000240204

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004212591 – 65Small lysine-rich protein 1Add BLAST65

Proteomic databases

PaxDbiH3BMG3
PRIDEiH3BMG3
ProteomicsDBi40903

Expressioni

Gene expression databases

BgeeiENSG00000240204 Expressed in 119 organ(s), highest expression level in sperm
GenevisibleiH3BMG3 HS

Organism-specific databases

HPAiHPA078358

Structurei

3D structure databases

ProteinModelPortaliH3BMG3
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG410J5M4 Eukaryota
ENOG410Z5SG LUCA
GeneTreeiENSGT00640000091917
InParanoidiH3BMG3
OMAiNAYYTCH
OrthoDBiEOG091G1A49
TreeFamiTF339494

Family and domain databases

InterProiView protein in InterPro
IPR037760 SMKR1
PANTHERiPTHR37932 PTHR37932, 1 hit

Sequencei

Sequence statusi: Complete.

H3BMG3-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MPAKGKKGKG QGKSHGKKQK KPEVDILSPA AMLNLYYIAH NVADCLHLRG
60
FHWPGAPKGK KGRSK
Length:65
Mass (Da):7,091
Last modified:April 18, 2012 - v1
Checksum:i414CABE86C30C0A1
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009244 Genomic DNA No translation available.
BC050400 mRNA No translation available.
CCDSiCCDS59077.1
RefSeqiNP_001182172.1, NM_001195243.1
UniGeneiHs.178144

Genome annotation databases

EnsembliENST00000462322; ENSP00000454370; ENSG00000240204
GeneIDi100287482
KEGGihsa:100287482
UCSCiuc003voy.3 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC009244 Genomic DNA No translation available.
BC050400 mRNA No translation available.
CCDSiCCDS59077.1
RefSeqiNP_001182172.1, NM_001195243.1
UniGeneiHs.178144

3D structure databases

ProteinModelPortaliH3BMG3
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

PaxDbiH3BMG3
PRIDEiH3BMG3
ProteomicsDBi40903

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000462322; ENSP00000454370; ENSG00000240204
GeneIDi100287482
KEGGihsa:100287482
UCSCiuc003voy.3 human

Organism-specific databases

CTDi100287482
EuPathDBiHostDB:ENSG00000240204.2
GeneCardsiSMKR1
HGNCiHGNC:43561 SMKR1
HPAiHPA078358
neXtProtiNX_H3BMG3
OpenTargetsiENSG00000240204
GenAtlasiSearch...

Phylogenomic databases

eggNOGiENOG410J5M4 Eukaryota
ENOG410Z5SG LUCA
GeneTreeiENSGT00640000091917
InParanoidiH3BMG3
OMAiNAYYTCH
OrthoDBiEOG091G1A49
TreeFamiTF339494

Miscellaneous databases

PROiPR:H3BMG3

Gene expression databases

BgeeiENSG00000240204 Expressed in 119 organ(s), highest expression level in sperm
GenevisibleiH3BMG3 HS

Family and domain databases

InterProiView protein in InterPro
IPR037760 SMKR1
PANTHERiPTHR37932 PTHR37932, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiSMKR1_HUMAN
AccessioniPrimary (citable) accession number: H3BMG3
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 6, 2013
Last sequence update: April 18, 2012
Last modified: September 12, 2018
This is version 38 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Human chromosome 7
    Human chromosome 7: entries, gene names and cross-references to MIM
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Main funding by: National Institutes of Health

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