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Protein
Submitted name:

Enhancer of mRNA-decapping protein 3

Gene

EDC3

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Enhancer of mRNA-decapping protein 3Imported
Gene namesi
Name:EDC3Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 15

Organism-specific databases

EuPathDBiHostDB:ENSG00000179151.11
HGNCiHGNC:26114 EDC3

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000179151

PTM / Processingi

Proteomic databases

MaxQBiH3BMB8
PeptideAtlasiH3BMB8

Expressioni

Gene expression databases

BgeeiENSG00000179151 Expressed in 158 organ(s), highest expression level in testis
ExpressionAtlasiH3BMB8 baseline and differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 80LSM14InterPro annotationAdd BLAST80

Phylogenomic databases

eggNOGiKOG2585 Eukaryota
COG0062 LUCA
GeneTreeiENSGT00390000016435

Family and domain databases

CDDicd01737 LSm16_N, 1 hit
InterProiView protein in InterPro
IPR025609 Lsm14-like_N
IPR034107 Lsm16_N
PfamiView protein in Pfam
PF12701 LSM14, 1 hit
SMARTiView protein in SMART
SM01271 LSM14, 1 hit

Sequence (1+)i

Sequence statusi: Fragment.

This entry has 1 described isoform and 12 potential isoforms that are computationally mapped.Show allAlign All

H3BMB8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MATDWLGSIV SINCGDSLGV YQGRVSAVDQ VSQTISLTRP FHNGVKCLVP
60 70 80 90
EVTFRAGDIT ELKILEIPGP GDNQHFGDLH QTELGPSGAG CQ
Length:92
Mass (Da):9,752
Last modified:April 18, 2012 - v1
Checksum:iD9F1278E9782E155
GO

Computationally mapped potential isoform sequencesi

There are 12 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
Q96F86EDC3_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3 LSM16, YJDC, YJEFN2, PP844
508Annotation score:
H3BPN4H3BPN4_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
213Annotation score:
H3BSQ0H3BSQ0_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
163Annotation score:
H3BPW9H3BPW9_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
253Annotation score:
H3BQ37H3BQ37_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
177Annotation score:
H3BU87H3BU87_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
131Annotation score:
H3BQP5H3BQP5_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
123Annotation score:
H3BNJ7H3BNJ7_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
57Annotation score:
H3BTF8H3BTF8_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
54Annotation score:
H3BTH0H3BTH0_HUMAN
Enhancer of mRNA-decapping protein ...
EDC3
101Annotation score:
There are more potential isoformsShow all

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei92Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091230 Genomic DNA No translation available.
AC100835 Genomic DNA No translation available.

Genome annotation databases

EnsembliENST00000563292; ENSP00000454317; ENSG00000179151
UCSCiuc059lki.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC091230 Genomic DNA No translation available.
AC100835 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH3BMB8
PeptideAtlasiH3BMB8

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000563292; ENSP00000454317; ENSG00000179151
UCSCiuc059lki.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000179151.11
HGNCiHGNC:26114 EDC3
OpenTargetsiENSG00000179151
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG2585 Eukaryota
COG0062 LUCA
GeneTreeiENSGT00390000016435

Miscellaneous databases

ChiTaRSiEDC3 human

Gene expression databases

BgeeiENSG00000179151 Expressed in 158 organ(s), highest expression level in testis
ExpressionAtlasiH3BMB8 baseline and differential

Family and domain databases

CDDicd01737 LSm16_N, 1 hit
InterProiView protein in InterPro
IPR025609 Lsm14-like_N
IPR034107 Lsm16_N
PfamiView protein in Pfam
PF12701 LSM14, 1 hit
SMARTiView protein in SMART
SM01271 LSM14, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH3BMB8_HUMAN
AccessioniPrimary (citable) accession number: H3BMB8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 12, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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