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Protein
Submitted name:

T-box transcription factor T

Gene

TBXT

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.PROSITE-ProRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationSAAS annotation

Names & Taxonomyi

Protein namesi
Submitted name:
T-box transcription factor TImported
Gene namesi
Name:TBXTImported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000017539

Family & Domainsi

Phylogenomic databases

eggNOGiKOG3585 Eukaryota
ENOG410XSTS LUCA
GeneTreeiENSGT00900000140847
InParanoidiH3B6L8
KOiK10172
OMAiAPSCVYI
OrthoDBiEOG091G05OC
TreeFamiTF106341

Family and domain databases

CDDicd00182 TBOX, 1 hit
Gene3Di2.60.40.820, 1 hit
InterProiView protein in InterPro
IPR008967 p53-like_TF_DNA-bd
IPR036960 T-box_sf
IPR002070 TF_Brachyury
IPR001699 TF_T-box
IPR018186 TF_T-box_CS
PANTHERiPTHR11267 PTHR11267, 1 hit
PfamiView protein in Pfam
PF00907 T-box, 1 hit
PRINTSiPR00938 BRACHYURY
PR00937 TBOX
SMARTiView protein in SMART
SM00425 TBOX, 1 hit
SUPFAMiSSF49417 SSF49417, 1 hit
PROSITEiView protein in PROSITE
PS01283 TBOX_1, 1 hit
PS01264 TBOX_2, 1 hit
PS50252 TBOX_3, 1 hit

Sequencei

Sequence statusi: Complete.

H3B6L8-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSSGTESSG KSLQYRVDHL LSAVENELQA GSEKGDPTER ELKVTLEENE
60 70 80 90 100
LWHKFKELTN EMIVTKNGRR MFPVLKVNVS GLDPNAMYSF LLDFVAADNH
110 120 130 140 150
RWKYVNGEWV PGGKPEPQAP SCVYIHPDSP NFGAHWMKAP VSFSKVKLTN
160 170 180 190 200
KLNGGGQIML NSLHKYEPRI HIVRVGGPQR MITSHSFPET QFIAVTAYQN
210 220 230 240 250
EEITALKIKY NPFAKAFLDA KERSDHKEIM DEMGDNQQSG YSQCGWFIPG
260 270 280 290 300
TGTLCPPANP HPQFGAPLSL SSAHGCERYS SLRNHRSAPY PSPYSHRNNS
310 320 330 340 350
PTSYADNSSA CLSMLPAHDN WSSLQVPTHT SMLPMTHSTG SSSGTSQYPS
360 370 380 390 400
LWSVSNSTIT PVSQSGGMSN GLGSQFLRGS TAHYTALPHS ITASSSGSPL
410 420 430
YDSGAPTDVP DSQYDTSPHA RLTSTWTPVT PPSL
Length:434
Mass (Da):47,518
Last modified:April 18, 2012 - v1
Checksum:i1B19EB9177C0F1A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01046708 Genomic DNA No translation available.
RefSeqiXP_005993409.1, XM_005993347.1

Genome annotation databases

EnsembliENSLACT00000017669; ENSLACP00000017539; ENSLACG00000015449
GeneIDi102362660
KEGGilcm:102362660

Similar proteinsi

Entry informationi

Entry nameiH3B6L8_LATCH
AccessioniPrimary (citable) accession number: H3B6L8
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: September 12, 2018
This is version 48 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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