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Protein
Submitted name:

BRCA1 interacting protein C-terminal helicase 1

Gene

BRIP1

Organism
Latimeria chalumnae (West Indian ocean coelacanth)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
BRCA1 interacting protein C-terminal helicase 1Imported
Gene namesi
Name:BRIP1Imported
OrganismiLatimeria chalumnae (West Indian ocean coelacanth)Imported
Taxonomic identifieri7897 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiCoelacanthiformesCoelacanthidaeLatimeria
Proteomesi
  • UP000008672 Componenti: Unassembled WGS sequence

Interactioni

Protein-protein interaction databases

STRINGi7897.ENSLACP00000015614

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 458Helicase ATP-bindingInterPro annotationAdd BLAST448

Phylogenomic databases

eggNOGiKOG1132 Eukaryota
COG1199 LUCA
GeneTreeiENSGT00530000063199
InParanoidiH3B143
OMAiAIFIESK
OrthoDBiEOG091G00LK
TreeFamiTF329449

Family and domain databases

InterProiView protein in InterPro
IPR010614 DEAD_2
IPR014013 Helic_SF1/SF2_ATP-bd_DinG/Rad3
IPR006554 Helicase-like_DEXD_c2
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF06733 DEAD_2, 1 hit
SMARTiView protein in SMART
SM00488 DEXDc2, 1 hit
SUPFAMiSSF52540 SSF52540, 3 hits
PROSITEiView protein in PROSITE
PS51193 HELICASE_ATP_BIND_2, 1 hit

Sequencei

Sequence statusi: Complete.

H3B143-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSTTSSEYTV GGVKIIFPFK AYPCQLAMMN SIIRGLKSQQ HCLLESPTGS
60 70 80 90 100
GKSLALLCSA LAWQQSAYDK QVDVGTGEDD CKKKENVPPC HCKCHEAKVP
110 120 130 140 150
PCNTTEQAGP SALNCQTAPS SNKLSPAGNK GGAEDYPLQK KTIASKLSAK
160 170 180 190 200
MQACFAEGED DFQSDKKRIC ALANKVSARK RRCLEKGVQF IDDEPVMDAG
210 220 230 240 250
GAGQQDWKME LNSEATQSSS YIAQESPSPC IQCSCATEKL KGKESNSVKG
260 270 280 290 300
KENGEKQQVP KIFFGTRTHK QIAQIARELR RTVYSGVRMT ILSSRDHTCV
310 320 330 340 350
HPQVSRSGNR NERCKELLDA KDGSSCRYYH GVQKLSEQRV IQRLYGLHHA
360 370 380 390 400
WDIEELVALG KKLHACAYFA ARELMQDADI VFCPYNYLLD PQIRESMDIN
410 420 430 440 450
LKGQVVILDE AHNIEDCARE SASFSVTHAQ LMFAREELDS MVNHDIRRSN
460 470 480 490 500
HEPLRAVCYS LTNWIMESSN SLVEQGYETS SRVWSGKDMV AIFHNMGITS
510 520 530 540 550
ATFSILKRHL AIVTEKEEKT TMLSGREEVL QIPTISSPSQ IVLKGLFMVM
560 570 580 590 600
EFLFRDDSRF ANDYRVALQQ TYTWVNRPDV PDQSGFFTRP SNRRSVRQKT
610 620 630 640 650
AVHMLNFWCL NPAVAFSDLS SSSRTIVLTS GTLSPMESFS SELGVKFTIQ
660 670 680 690 700
LEANHVVTKS QVWVGTIGSG PKGRKLCATF EHTETFEFQD EVGALLQSIC
710
QAISCGVLCF LPSYKV
Length:716
Mass (Da):79,740
Last modified:April 18, 2012 - v1
Checksum:iBAF32C277A79CC7E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01004222 Genomic DNA No translation available.
AFYH01004223 Genomic DNA No translation available.
AFYH01004224 Genomic DNA No translation available.
AFYH01004225 Genomic DNA No translation available.
AFYH01004226 Genomic DNA No translation available.
AFYH01004227 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSLACT00000015722; ENSLACP00000015614; ENSLACG00000013747

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AFYH01004222 Genomic DNA No translation available.
AFYH01004223 Genomic DNA No translation available.
AFYH01004224 Genomic DNA No translation available.
AFYH01004225 Genomic DNA No translation available.
AFYH01004226 Genomic DNA No translation available.
AFYH01004227 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi7897.ENSLACP00000015614

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSLACT00000015722; ENSLACP00000015614; ENSLACG00000013747

Phylogenomic databases

eggNOGiKOG1132 Eukaryota
COG1199 LUCA
GeneTreeiENSGT00530000063199
InParanoidiH3B143
OMAiAIFIESK
OrthoDBiEOG091G00LK
TreeFamiTF329449

Family and domain databases

InterProiView protein in InterPro
IPR010614 DEAD_2
IPR014013 Helic_SF1/SF2_ATP-bd_DinG/Rad3
IPR006554 Helicase-like_DEXD_c2
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF06733 DEAD_2, 1 hit
SMARTiView protein in SMART
SM00488 DEXDc2, 1 hit
SUPFAMiSSF52540 SSF52540, 3 hits
PROSITEiView protein in PROSITE
PS51193 HELICASE_ATP_BIND_2, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH3B143_LATCH
AccessioniPrimary (citable) accession number: H3B143
Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: April 18, 2012
Last modified: March 28, 2018
This is version 26 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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