UniProtKB - H2YWV4 (H2YWV4_CIOSA)
Protein
Submitted name:
Uncharacterized protein
Gene
N/A
Organism
Ciona savignyi (Pacific transparent sea squirt)
Status
Functioni
GO - Molecular functioni
- DNA-binding transcription factor activity Source: InterPro
- nucleic acid binding Source: UniProtKB-UniRule
- zinc ion binding Source: InterPro
Keywordsi
Biological process | Transcription, Transcription regulationARBA annotation |
Ligand | Metal-binding, Zinc |
Names & Taxonomyi
Protein namesi | Submitted name: Uncharacterized proteinImported |
Organismi | Ciona savignyi (Pacific transparent sea squirt)Imported |
Taxonomic identifieri | 51511 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Tunicata › Ascidiacea › Enterogona › Phlebobranchia › Cionidae › Ciona |
Proteomesi |
|
Subcellular locationi
Keywords - Cellular componenti
NucleusARBA annotationFamily & Domainsi
Domains and Repeats
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Domaini | 258 – 316 | PHD-typeInterPro annotationAdd BLAST | 59 | |
Domaini | 261 – 314 | RING-typeInterPro annotationAdd BLAST | 54 | |
Domaini | 892 – 960 | R3HInterPro annotationAdd BLAST | 69 |
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 1 – 37 | DisorderedSequence analysisAdd BLAST | 37 | |
Regioni | 132 – 233 | DisorderedSequence analysisAdd BLAST | 102 | |
Regioni | 1007 – 1111 | DisorderedSequence analysisAdd BLAST | 105 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 1 – 20 | PolyampholyteSequence analysisAdd BLAST | 20 | |
Compositional biasi | 165 – 204 | PolyampholyteSequence analysisAdd BLAST | 40 | |
Compositional biasi | 215 – 233 | PolyampholyteSequence analysisAdd BLAST | 19 | |
Compositional biasi | 1007 – 1042 | PolarSequence analysisAdd BLAST | 36 | |
Compositional biasi | 1050 – 1064 | PolyampholyteSequence analysisAdd BLAST | 15 | |
Compositional biasi | 1090 – 1105 | PolarSequence analysisAdd BLAST | 16 |
Sequence similaritiesi
Belongs to the NFX1 family.ARBA annotation
Keywords - Domaini
RepeatARBA annotation, Zinc-fingerPROSITE-ProRule annotationARBA annotationPhylogenomic databases
eggNOGi | KOG1952, Eukaryota |
GeneTreei | ENSGT00940000156325 |
HOGENOMi | CLU_005714_1_1_1 |
InParanoidi | H2YWV4 |
OMAi | HPCEHPP |
TreeFami | TF105889 |
Family and domain databases
CDDi | cd02643, R3H_NF-X1, 1 hit |
Gene3Di | 3.30.1370.50, 1 hit |
InterProi | View protein in InterPro IPR034078, NFX1_fam IPR001374, R3H_dom IPR036867, R3H_dom_sf IPR034076, R3H_NF-X1 IPR019786, Zinc_finger_PHD-type_CS IPR000967, Znf_NFX1 IPR019787, Znf_PHD-finger IPR001841, Znf_RING |
PANTHERi | PTHR12360, PTHR12360, 1 hit |
Pfami | View protein in Pfam PF01424, R3H, 1 hit PF01422, zf-NF-X1, 6 hits |
SMARTi | View protein in SMART SM00393, R3H, 1 hit SM00438, ZnF_NFX, 9 hits |
SUPFAMi | SSF82708, SSF82708, 1 hit |
PROSITEi | View protein in PROSITE PS51061, R3H, 1 hit PS01359, ZF_PHD_1, 1 hit PS50016, ZF_PHD_2, 1 hit PS50089, ZF_RING_2, 1 hit |
i Sequence
Sequence statusi: Complete.
H2YWV4-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MVDFRGPPER RQDGSSQSRQ ERRQPRGFIP PHGVSNQAEQ FQPNVAEFYS
60 70 80 90 100
NSTAGYLPPD LHYDGRGYET PNLFYPAEFA NQPTYFGPNY MMAGTTTYPG
110 120 130 140 150
TSMPHAFESP GFYADDMTAH FTENQHYQTM LPDNSSAAGK SRRFSRQRNI
160 170 180 190 200
KESGTSGEMY NPKLTAEDCR PHKNDRRSHQ FKQPIRFSHQ KENQNGKKTE
210 220 230 240 250
NIKDPGSKNT QAKGMNESKP EEKAPKSFSR TKGKKVEVMK YDGGNQASVL
260 270 280 290 300
HEQLSSGTYE CMVCCDRVRP PQAVWSCMIC YNVFHMGCIK KWARSPAAKV
310 320 330 340 350
GGTEDSGWRC PGCQNVSAKI PASYLCFCGK VKEPEYKKGE MPHSCGDLCG
360 370 380 390 400
KARRNNPDCA HPCNILCHPG PCPQFPAMVT KRCKCGKISS RVRCSQQKSL
410 420 430 440 450
ACNEVCGKNK NCSNHSCDVV CHSGDCDPCH VKIKQACYCG LEDREVGCGS
460 470 480 490 500
EEHRSQPNDT ENGCYSCTNI CNRVLSCGNH NCSSVCHPGP CKPCSLLPSL
510 520 530 540 550
VTRCPCSQTK LSDMQIDDGE EINRKSCLDP VPTCDKICGK PLLCGGEDVH
560 570 580 590 600
VCKQLCHTGP CSPCSDGEST IVCRCRKSEK DVPCTEFVEM DSYVCDRRCN
610 620 630 640 650
KKRKCGKHKC GQMCCTDTEH NCLQLCGRKL TCGNHRCDET CHRGACHTCY
660 670 680 690 700
NVSFDELRCF CNDKVIFPPI PCGMKAPECN KICSRMHPCT HPVRHSCHTE
710 720 730 740 750
EHCPPCVELV KKTCNCGRTI RGNIMCHIDN VSCGAPCFKV LACGHKCLRP
760 770 780 790 800
CHKGMCIEDV EPCKQPCSIM RVECIHPCAN PCHHGTACPT TPCKAMVTMK
810 820 830 840 850
CECSRREEQV VCSAGGAIYQ SVSSAAFASK QDGVINIDKI LQTSGLPCDE
860 870 880 890 900
ECSVAARNKR FADALNITDA EYGSRPKQQY SEFLINMAKS DLAFIRTVEK
910 920 930 940 950
DLINLVESVG WLDVTKQSHT FPVMRREKRQ AVHELADAFQ CRSESLDVEP
960 970 980 990 1000
NRSVVATATK SVSKQPTPLL SDVIMEQVTS EKVYSSSKQA QSKGRVLSSV
1010 1020 1030 1040 1050
KLVSFNSASS DSTSRPVLTR KSTASGASGP SLKSSLNRPE ISRSTLHRPA
1060 1070 1080 1090 1100
YAPDGRKEAV RIPPKVAPEH ATGSRQEVKP SATKYAPPHQ RSAPATNTTK
1110
SKVIDYFDMS D
Genome annotation databases
Ensembli | ENSCSAVT00000009933; ENSCSAVP00000009815; ENSCSAVG00000005762 |
Similar proteinsi
Cross-referencesi
3D structure databases
ModBasei | Search... |
SWISS-MODEL-Workspacei | Submit a new modelling project... |
Protein-protein interaction databases
STRINGi | 51511.ENSCSAVP00000009815 |
Genome annotation databases
Ensembli | ENSCSAVT00000009933; ENSCSAVP00000009815; ENSCSAVG00000005762 |
Phylogenomic databases
eggNOGi | KOG1952, Eukaryota |
GeneTreei | ENSGT00940000156325 |
HOGENOMi | CLU_005714_1_1_1 |
InParanoidi | H2YWV4 |
OMAi | HPCEHPP |
TreeFami | TF105889 |
Family and domain databases
CDDi | cd02643, R3H_NF-X1, 1 hit |
Gene3Di | 3.30.1370.50, 1 hit |
InterProi | View protein in InterPro IPR034078, NFX1_fam IPR001374, R3H_dom IPR036867, R3H_dom_sf IPR034076, R3H_NF-X1 IPR019786, Zinc_finger_PHD-type_CS IPR000967, Znf_NFX1 IPR019787, Znf_PHD-finger IPR001841, Znf_RING |
PANTHERi | PTHR12360, PTHR12360, 1 hit |
Pfami | View protein in Pfam PF01424, R3H, 1 hit PF01422, zf-NF-X1, 6 hits |
SMARTi | View protein in SMART SM00393, R3H, 1 hit SM00438, ZnF_NFX, 9 hits |
SUPFAMi | SSF82708, SSF82708, 1 hit |
PROSITEi | View protein in PROSITE PS51061, R3H, 1 hit PS01359, ZF_PHD_1, 1 hit PS50016, ZF_PHD_2, 1 hit PS50089, ZF_RING_2, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | H2YWV4_CIOSA | |
Accessioni | H2YWV4Primary (citable) accession number: H2YWV4 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | April 18, 2012 |
Last sequence update: | April 18, 2012 | |
Last modified: | October 7, 2020 | |
This is version 50 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |