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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Caenorhabditis japonica
Status
Unreviewed-Annotation score:

Annotation score:1 out of 5

<p>The annotation score provides a heuristic measure of the annotation content of a UniProtKB entry or proteome. This score <strong>cannot</strong> be used as a measure of the accuracy of the annotation as we cannot define the ‘correct annotation’ for any given protein.<p><a href='/help/annotation_score' target='_top'>More...</a></p>
-Protein predictedi <p>This indicates the type of evidence that supports the existence of the protein. Note that the ‘protein existence’ evidence does not give information on the accuracy or correctness of the sequence(s) displayed.<p><a href='/help/protein_existence' target='_top'>More...</a></p>

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

GO - Biological processi

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides an exhaustive list of all names of the protein, from commonly used to obsolete, to allow unambiguous identification of a protein.<p><a href='/help/protein_names' target='_top'>More...</a></p>Protein namesi
Submitted name:
Uncharacterized proteinImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section provides information on the name(s) of the organism that is the source of the protein sequence.<p><a href='/help/organism-name' target='_top'>More...</a></p>OrganismiCaenorhabditis japonicaImported
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section shows the unique identifier assigned by the NCBI to the source organism of the protein. This is known as the ‘taxonomic identifier’ or ‘taxid’.<p><a href='/help/taxonomic_identifier' target='_top'>More...</a></p>Taxonomic identifieri281687 [NCBI]
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section contains the taxonomic hierarchical classification lineage of the source organism. It lists the nodes as they appear top-down in the taxonomic tree, with the more general grouping listed first.<p><a href='/help/taxonomic_lineage' target='_top'>More...</a></p>Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditinaRhabditomorphaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
<p>This subsection of the <a href="http://www.uniprot.org/help/names_and_taxonomy_section">Names and taxonomy</a> section is present for entries that are part of a <a href="http://www.uniprot.org/proteomes">proteome</a>, i.e. of a set of proteins thought to be expressed by organisms whose genomes have been completely sequenced.<p><a href='/help/proteomes_manual' target='_top'>More...</a></p>Proteomesi
  • UP000005237 <p>A UniProt <a href="http://www.uniprot.org/manual/proteomes_manual">proteome</a> can consist of several components. <br></br>The component name refers to the genomic component encoding a set of proteins.<p><a href='/help/proteome_component' target='_top'>More...</a></p> Componenti: Unassembled WGS sequence

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
<p>This subsection of the <a href="http://www.uniprot.org/help/family_and_domains_section">Family and Domains</a> section describes the position and type of a domain, which is defined as a specific combination of secondary structures organized into a characteristic three-dimensional structure or fold.<p><a href='/help/domain' target='_top'>More...</a></p>Domaini17 – 44HTH luxR-typeInterPro annotationAdd BLAST28

Phylogenomic databases

evolutionary genealogy of genes: Non-supervised Orthologous Groups

More...
eggNOGi
ENOG410JFPC Eukaryota
ENOG410XX07 LUCA

Family and domain databases

Integrated resource of protein families, domains and functional sites

More...
InterProi
View protein in InterPro
IPR009057 Homeobox-like_sf
IPR000792 Tscrpt_reg_LuxR_C

Superfamily database of structural and functional annotation

More...
SUPFAMi
SSF46689 SSF46689, 1 hit

PROSITE; a protein domain and family database

More...
PROSITEi
View protein in PROSITE
PS00622 HTH_LUXR_1, 1 hit

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including <a href="http://www.uniprot.org/help/sequence_length">length</a> and <a href="http://www.uniprot.org/help/sequences">molecular weight</a>.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

<p>This subsection of the <a href="http://www.uniprot.org/help/sequences_section">Sequence</a> section indicates if the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> displayed by default in the entry is complete or not.<p><a href='/help/sequence_status' target='_top'>More...</a></p>Sequence statusi: Complete.

H2VUR2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MKSSPHRPSI ELLFKRGLGS AEIARRLQIS SSTVRNVVAA IKKRGDASEV
60 70 80 90 100
KKSGRPRSVN TRNTRAIIKK RIIRNDGLSL NRMASQLGIA RSTVQSIVKN
110 120 130 140 150
DLKLKSYKLR RGQYLSDKSK AMRLEKCRKL LQHFQVRRVS DVIWTDEKIF
160 170 180 190 200
TIEPLPNRQN QRQLLSKDDS MSPKRRLAHN RLFPKSVMVW AGITATGKTP
210 220 230 240 250
LVFIERNVKI NSEVYQKIVL MDNLLPWVTQ HFAGGPFILQ QDWAPSHGSR
260 270 280 290 300
STLAVLEAHF PGFLDKNLWP ASSPDLNPMD FSVWGMLEGK IAGKVFATVD
310 320 330 340
DLKAALEVAW ASIDDGYLRR TVNSVKKRLR ACVKARGSNF EILL
Length:344
Mass (Da):38,949
Last modified:January 9, 2013 - v2
<p>The checksum is a form of redundancy check that is calculated from the sequence. It is useful for tracking sequence updates.</p> <p>It should be noted that while, in theory, two different sequences could have the same checksum value, the likelihood that this would happen is extremely low.</p> <p>However UniProtKB may contain entries with identical sequences in case of multiple genes (paralogs).</p> <p>The checksum is computed as the sequence 64-bit Cyclic Redundancy Check value (CRC64) using the generator polynomial: x<sup>64</sup> + x<sup>4</sup> + x<sup>3</sup> + x + 1. The algorithm is described in the ISO 3309 standard. </p> <p class="publication">Press W.H., Flannery B.P., Teukolsky S.A. and Vetterling W.T.<br /> <strong>Cyclic redundancy and other checksums</strong><br /> <a href="http://www.nrbook.com/b/bookcpdf.php">Numerical recipes in C 2nd ed., pp896-902, Cambridge University Press (1993)</a>)</p> Checksum:i1F0EFB669AE64B24
GO

Genome annotation databases

Ensembl metazoan genome annotation project

More...
EnsemblMetazoai
CJA02629; CJA02629; WBGene00121833
CJA05858; CJA05858; WBGene00125062
CJA08447; CJA08447; WBGene00127651
CJA09380; CJA09380; WBGene00128584
CJA10237; CJA10237; WBGene00129441
CJA11720; CJA11720; WBGene00130924
CJA13741; CJA13741; WBGene00132945
CJA16335; CJA16335; WBGene00135539
CJA21062; CJA21062; WBGene00176634
CJA22385; CJA22385; WBGene00177957
CJA23565; CJA23565; WBGene00179137
CJA26527; CJA26527; WBGene00182099
CJA28229; CJA28229; WBGene00183803
CJA30706; CJA30706; WBGene00206553
CJA31057; CJA31057; WBGene00206904
CJA31180; CJA31180; WBGene00207027
CJA32178; CJA32178; WBGene00208025
CJA32265; CJA32265; WBGene00208112
CJA32765; CJA32765; WBGene00208612
CJA33003; CJA33003; WBGene00208850
CJA33264; CJA33264; WBGene00209111
CJA33458; CJA33458; WBGene00209305
CJA33671; CJA33671; WBGene00209518
CJA33928; CJA33928; WBGene00209775
CJA34115; CJA34115; WBGene00209962
CJA34132; CJA34132; WBGene00209979
CJA34486; CJA34486; WBGene00210333
CJA34521; CJA34521; WBGene00210368
CJA34808; CJA34808; WBGene00210655
CJA35049; CJA35049; WBGene00210896
CJA35832; CJA35832; WBGene00211679
CJA35914; CJA35914; WBGene00211761
CJA35992; CJA35992; WBGene00211839
CJA35993; CJA35993; WBGene00211840
CJA36030; CJA36030; WBGene00211877
CJA36536; CJA36536; WBGene00212383
CJA36681; CJA36681; WBGene00212528
CJA36855; CJA36855; WBGene00212702
CJA37476; CJA37476; WBGene00213323
CJA38161; CJA38161; WBGene00214008
CJA38417; CJA38417; WBGene00214264
CJA38824; CJA38824; WBGene00214671
CJA39094; CJA39094; WBGene00214941
CJA39135; CJA39135; WBGene00214982
CJA39357; CJA39357; WBGene00215204
CJA39630; CJA39630; WBGene00215477
CJA39994; CJA39994; WBGene00215842
CJA40405; CJA40405; WBGene00216253
CJA40419; CJA40419; WBGene00216267
CJA40503; CJA40503; WBGene00216351
CJA40694; CJA40694; WBGene00216542
CJA41048; CJA41048; WBGene00216896
CJA41154; CJA41154; WBGene00217002
CJA41207; CJA41207; WBGene00217055
CJA41552; CJA41552; WBGene00217400
CJA41662; CJA41662; WBGene00217510
CJA41932; CJA41932; WBGene00217780
CJA42032; CJA42032; WBGene00217880
CJA42880; CJA42880; WBGene00218728
CJA43076; CJA43076; WBGene00218924
CJA43218; CJA43218; WBGene00219066

<p>This section provides links to proteins that are similar to the protein sequence(s) described in this entry at different levels of sequence identity thresholds (100%, 90% and 50%) based on their membership in UniProt Reference Clusters (<a href="http://www.uniprot.org/help/uniref">UniRef</a>).<p><a href='/help/similar_proteins_section' target='_top'>More...</a></p>Similar proteinsi

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

3D structure databases

Database of comparative protein structure models

More...
ModBasei
Search...

MobiDB: a database of protein disorder and mobility annotations

More...
MobiDBi
Search...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiCJA02629; CJA02629; WBGene00121833
CJA05858; CJA05858; WBGene00125062
CJA08447; CJA08447; WBGene00127651
CJA09380; CJA09380; WBGene00128584
CJA10237; CJA10237; WBGene00129441
CJA11720; CJA11720; WBGene00130924
CJA13741; CJA13741; WBGene00132945
CJA16335; CJA16335; WBGene00135539
CJA21062; CJA21062; WBGene00176634
CJA22385; CJA22385; WBGene00177957
CJA23565; CJA23565; WBGene00179137
CJA26527; CJA26527; WBGene00182099
CJA28229; CJA28229; WBGene00183803
CJA30706; CJA30706; WBGene00206553
CJA31057; CJA31057; WBGene00206904
CJA31180; CJA31180; WBGene00207027
CJA32178; CJA32178; WBGene00208025
CJA32265; CJA32265; WBGene00208112
CJA32765; CJA32765; WBGene00208612
CJA33003; CJA33003; WBGene00208850
CJA33264; CJA33264; WBGene00209111
CJA33458; CJA33458; WBGene00209305
CJA33671; CJA33671; WBGene00209518
CJA33928; CJA33928; WBGene00209775
CJA34115; CJA34115; WBGene00209962
CJA34132; CJA34132; WBGene00209979
CJA34486; CJA34486; WBGene00210333
CJA34521; CJA34521; WBGene00210368
CJA34808; CJA34808; WBGene00210655
CJA35049; CJA35049; WBGene00210896
CJA35832; CJA35832; WBGene00211679
CJA35914; CJA35914; WBGene00211761
CJA35992; CJA35992; WBGene00211839
CJA35993; CJA35993; WBGene00211840
CJA36030; CJA36030; WBGene00211877
CJA36536; CJA36536; WBGene00212383
CJA36681; CJA36681; WBGene00212528
CJA36855; CJA36855; WBGene00212702
CJA37476; CJA37476; WBGene00213323
CJA38161; CJA38161; WBGene00214008
CJA38417; CJA38417; WBGene00214264
CJA38824; CJA38824; WBGene00214671
CJA39094; CJA39094; WBGene00214941
CJA39135; CJA39135; WBGene00214982
CJA39357; CJA39357; WBGene00215204
CJA39630; CJA39630; WBGene00215477
CJA39994; CJA39994; WBGene00215842
CJA40405; CJA40405; WBGene00216253
CJA40419; CJA40419; WBGene00216267
CJA40503; CJA40503; WBGene00216351
CJA40694; CJA40694; WBGene00216542
CJA41048; CJA41048; WBGene00216896
CJA41154; CJA41154; WBGene00217002
CJA41207; CJA41207; WBGene00217055
CJA41552; CJA41552; WBGene00217400
CJA41662; CJA41662; WBGene00217510
CJA41932; CJA41932; WBGene00217780
CJA42032; CJA42032; WBGene00217880
CJA42880; CJA42880; WBGene00218728
CJA43076; CJA43076; WBGene00218924
CJA43218; CJA43218; WBGene00219066

Phylogenomic databases

eggNOGiENOG410JFPC Eukaryota
ENOG410XX07 LUCA

Family and domain databases

InterProiView protein in InterPro
IPR009057 Homeobox-like_sf
IPR000792 Tscrpt_reg_LuxR_C
SUPFAMiSSF46689 SSF46689, 1 hit
PROSITEiView protein in PROSITE
PS00622 HTH_LUXR_1, 1 hit

ProtoNet; Automatic hierarchical classification of proteins

More...
ProtoNeti
Search...

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This subsection of the ‘Entry information’ section provides a mnemonic identifier for a UniProtKB entry, but it is not a stable identifier. Each reviewed entry is assigned a unique entry name upon integration into UniProtKB/Swiss-Prot.<p><a href='/help/entry_name' target='_top'>More...</a></p>Entry nameiH2VUR2_CAEJA
<p>This subsection of the ‘Entry information’ section provides one or more accession number(s). These are stable identifiers and should be used to cite UniProtKB entries. Upon integration into UniProtKB, each entry is assigned a unique accession number, which is called ‘Primary (citable) accession number’.<p><a href='/help/accession_numbers' target='_top'>More...</a></p>AccessioniPrimary (citable) accession number: H2VUR2
Secondary accession number(s): H2VM66
, H2W2Z3, H2W4Y3, H2W8E2, H2WD52, H2WJ80, H2XBD3, H2XG62
<p>This subsection of the ‘Entry information’ section shows the date of integration of the entry into UniProtKB, the date of the last sequence update and the date of the last annotation modification (‘Last modified’). The version number for both the entry and the <a href="http://www.uniprot.org/help/canonical_and_isoforms">canonical sequence</a> are also displayed.<p><a href='/help/entry_history' target='_top'>More...</a></p>Entry historyiIntegrated into UniProtKB/TrEMBL: April 18, 2012
Last sequence update: January 9, 2013
Last modified: January 16, 2019
This is version 33 of the entry and version 2 of the sequence. See complete history.
<p>This subsection of the ‘Entry information’ section indicates whether the entry has been manually annotated and reviewed by UniProtKB curators or not, in other words, if the entry belongs to the Swiss-Prot section of UniProtKB (<strong>reviewed</strong>) or to the computer-annotated TrEMBL section (<strong>unreviewed</strong>).<p><a href='/help/entry_status' target='_top'>More...</a></p>Entry statusiUnreviewed (UniProtKB/TrEMBL)

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

<p>UniProtKB Keywords constitute a <a href="http://www.uniprot.org/keywords">controlled vocabulary</a> with a hierarchical structure. Keywords summarise the content of a UniProtKB entry and facilitate the search for proteins of interest.<p><a href='/help/keywords' target='_top'>More...</a></p>Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
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