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Protein
Submitted name:

SRY (sex determining region Y)-box 6

Gene
N/A
Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
SRY (sex determining region Y)-box 6Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
Proteomesi
  • UP000005226 Componenti: Unplaced

Family & Domainsi

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili150 – 170Sequence analysisAdd BLAST21
Coiled coili172 – 223Sequence analysisAdd BLAST52

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

GeneTreeiENSGT00760000119274

Family and domain databases

InterProiView protein in InterPro
IPR027153 SOX-6
PANTHERiPTHR10270:SF89 PTHR10270:SF89, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.iShow all

H2V547-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MSSKQATSPF ASVVDGDDAM SQDNLSWEKE ESAEAHGTPQ LPLHESDSNK
60 70 80 90 100
VCSQYSFRNN STSPHKPEEG ARERSDMLSG SAFGTPERRK GSLADVVDTL
110 120 130 140 150
KQKKLEEMTK TEQDESTCME KLLSKDWKEK MERLNTSELL AEVKGTPESL
160 170 180 190 200
AEKEHQLSTM ISQLISLREQ LLAAHDEQKK LAASQMEKQR QQMELARQQQ
210 220 230 240 250
EQIARQQQQL LQQQHKINLL QQQIQQVQGH MPPLMIPIFP HDQRTLAAAA
260 270 280 290 300
AAQQGFLFPP GMSYKPVTGD NYPVQFIPST MAAAAASGLS PLQLQQLYAA
310 320 330 340 350
QLASMQVSPG AKVPPLPQPL NTSGPISPSS LKNDKISTSP LTQVKIITSV

F
Length:351
Mass (Da):38,811
Last modified:March 21, 2012 - v1
Checksum:iA0C889A133B5AB90
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H2V543H2V543_TAKRU
SRY (sex determining region Y)-box ...
825Annotation score:
H2V544H2V544_TAKRU
SRY (sex determining region Y)-box ...
823Annotation score:
H2V542H2V542_TAKRU
SRY (sex determining region Y)-box ...
726Annotation score:
H2V546H2V546_TAKRU
SRY (sex determining region Y)-box ...
782Annotation score:
H2V545H2V545_TAKRU
SRY (sex determining region Y)-box ...
803Annotation score:

Genome annotation databases

EnsembliENSTRUT00000044479; ENSTRUP00000044331; ENSTRUG00000017299

Similar proteinsi

Entry informationi

Entry nameiH2V547_TAKRU
AccessioniPrimary (citable) accession number: H2V547
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 20, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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