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Protein

Neurogenic differentiation factor

Gene

NEUROD2 (1 of many)

Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDevelopmental proteinUniRule annotation, DNA-bindingUniRule annotation
Biological processDifferentiationUniRule annotation, NeurogenesisUniRule annotation, Transcription, Transcription regulationUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Neurogenic differentiation factorUniRule annotation
Gene namesi
Name:NEUROD2 (1 of many)Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
Proteomesi
  • UP000005226 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusUniRule annotation

Interactioni

GO - Molecular functioni

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini100 – 152BHLHInterPro annotationAdd BLAST53

Phylogenomic databases

eggNOGiENOG410IQ43 Eukaryota
ENOG41101JX LUCA
GeneTreeiENSGT00680000099860
KOiK09078
OMAiSGSPEYN
OrthoDBiEOG091G15AI
TreeFamiTF315153

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR032649 Neurod2
IPR022575 Neurogenic_DUF
IPR016637 TF_bHLH_NeuroD
PANTHERiPTHR19290:SF83 PTHR19290:SF83, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF12533 Neuro_bHLH, 1 hit
PIRSFiPIRSF015618 bHLH_NeuroD, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit

Sequencei

Sequence statusi: Complete.

H2UX28-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MLTRLFSDPS LLPDVQKYSG WGEDSDSDDN KLKDDDRDAQ DDGSELRDDS
60 70 80 90 100
RTQSEHAGED DDDDGVEEED DGDETEGDRP KKRGPKKRKM TQARIERSKV
110 120 130 140 150
RRVKANARER TRMHDLNSAL DNLRKVVPCY SKTQKLSKIE TLRLAKNYIW
160 170 180 190 200
ALSEILRSGK RPDLVSYVQT LCKGLSQPTT NLVAGCLQLN SRNFLTEQQC
210 220 230 240 250
QDGGRYGAGS FSMHSYPYQC ARLSSPHCQP SSNSHALRTQ GYCSAYDSLY
260 270 280 290 300
GGSGSPEYNS PEYEPPVSPP LCINGNFSLK HQGPASPENE KGYHYSMHYS
310 320 330 340 350
SLPGSRSTAA HNLVFGSSGT RGGIHSENVL PYHDMHLHHE RAPAYDELNA

FFHS
Length:354
Mass (Da):39,624
Last modified:March 21, 2012 - v1
Checksum:i6EA0382B1E6BC75C
GO

Sequence databases

RefSeqiXP_003964856.1, XM_003964807.1

Genome annotation databases

EnsembliENSTRUT00000041651; ENSTRUP00000041507; ENSTRUG00000016237
GeneIDi101073442
KEGGitru:101073442

Similar proteinsi

Cross-referencesi

Sequence databases

RefSeqiXP_003964856.1, XM_003964807.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTRUT00000041651; ENSTRUP00000041507; ENSTRUG00000016237
GeneIDi101073442
KEGGitru:101073442

Organism-specific databases

CTDi4761

Phylogenomic databases

eggNOGiENOG410IQ43 Eukaryota
ENOG41101JX LUCA
GeneTreeiENSGT00680000099860
KOiK09078
OMAiSGSPEYN
OrthoDBiEOG091G15AI
TreeFamiTF315153

Family and domain databases

CDDicd00083 HLH, 1 hit
Gene3Di4.10.280.10, 1 hit
InterProiView protein in InterPro
IPR011598 bHLH_dom
IPR036638 HLH_DNA-bd_sf
IPR032649 Neurod2
IPR022575 Neurogenic_DUF
IPR016637 TF_bHLH_NeuroD
PANTHERiPTHR19290:SF83 PTHR19290:SF83, 1 hit
PfamiView protein in Pfam
PF00010 HLH, 1 hit
PF12533 Neuro_bHLH, 1 hit
PIRSFiPIRSF015618 bHLH_NeuroD, 1 hit
SMARTiView protein in SMART
SM00353 HLH, 1 hit
SUPFAMiSSF47459 SSF47459, 1 hit
PROSITEiView protein in PROSITE
PS50888 BHLH, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH2UX28_TAKRU
AccessioniPrimary (citable) accession number: H2UX28
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: November 7, 2018
This is version 41 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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