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Protein
Submitted name:

Nuclear receptor subfamily 3, group C, member 2

Gene
N/A
Organism
Takifugu rubripes (Japanese pufferfish) (Fugu rubripes)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi611 – 689Nuclear receptorPROSITE-ProRule annotationAdd BLAST79

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
Nuclear receptor subfamily 3, group C, member 2Imported
OrganismiTakifugu rubripes (Japanese pufferfish) (Fugu rubripes)Imported
Taxonomic identifieri31033 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiNeoteleosteiAcanthomorphataEupercariaTetraodontiformesTetradontoideaTetraodontidaeTakifugu
Proteomesi
  • UP000005226 Componenti: Unplaced

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi31033.ENSTRUP00000037994

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini611 – 689Nuclear receptorInterPro annotationAdd BLAST79
Domaini745 – 976NR LBDInterPro annotationAdd BLAST232

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG3575 Eukaryota
ENOG410XRZC LUCA
GeneTreeiENSGT00760000118887
InParanoidiH2UM23
TreeFamiTF106510

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00430 HOLI, 1 hit
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 1 hit
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

H2UM23-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
METKRYQSYF DGCDTENRWS QVSGTMDSCS TEESSLTGSD ILMDIANVSC
60 70 80 90 100
SAESPATDRS TKKQEQPMLQ LSQNQPFLLP HFNNTLHGHK QEMDSKELSK
110 120 130 140 150
TVAESMGLYM NAAREADFAF SQHGGSASPG KMYSVCGRSL EEAQSGFTKS
160 170 180 190 200
FKLKPFGFQQ CNTTPRECTI GTTVSSASVL VPSISCSPQT PSSISSPGGS
210 220 230 240 250
NNMVSSTTSP PMCFGPMCSS VSSPVSQTSC ASTLPNIKRR NSATCSPVES
260 270 280 290 300
STVGSPPLTS PLNIMRSPIS SPQSMSSVRS PPSCSTTSNI RSSVSSPTGA
310 320 330 340 350
NCTSTANNCN TARPSISSPA IGGTVASSSP RNASVGSFPV SSPAGGLGLV
360 370 380 390 400
QNDTNSPEAA GLTRDADFKN FEFPKVEMVD GELFSVGVDH MGMVKYIKNE
410 420 430 440 450
PGSDFRSMCL ESSKCNASST PFITQIKSEP NKNDGCMNQQ PYSEPSQSLS
460 470 480 490 500
LFPSSETTYL SLRNNIDEYS LSGILGTPVS SLNGNYESDV FSNSVLSKGV
510 520 530 540 550
KQESPDGSYY QENNSMPTSA IVGVNSSGHS FHYQIGAQGT MAFTRHDVRD
560 570 580 590 600
QSNPLLNLIS PVTALMESWK SRPGMSQGSL SGRGEGYPGQ NCIPESSSTA
610 620 630 640 650
HSPLRQPTST AKVCLVCGDE ASGCHYGVVT CGSCKVFFKR AVEGSKSRHN
660 670 680 690 700
YLCAGRNDCI IDKIRRKNCP ACRVRKCFQA GMNLGARKSK KLGKLKAVSD
710 720 730 740 750
ELPGSKDAHT STGGVSGAYV PSEKELNASP ASALVPHGPG VVTPFLPPSI
760 770 780 790 800
CSVLELIEPE EVYSGYDNTQ PDTTDHLLSS LNRLAGKQMV RMVKWAKVLP
810 820 830 840 850
GFRGLPIEDQ ITLIQYSWMC LSSFCLSWRS YKHTNGQMLY FAPDLIFNEE
860 870 880 890 900
RMRQSAMYDL CLGMRQVSQE FLRLQLTYDE FLSMKVLLLL STVPKEGLKN
910 920 930 940 950
QAAFEEMRLN YVKELRRSVG KATNNSGQTW QRFFQLTKLL DAMHDLVGNL
960 970 980 990
LDFCFYTFRE SQALKVEFPE MLVEIISDQI PKVESGLTHT IYFHKK
Length:996
Mass (Da):108,118
Last modified:March 21, 2012 - v1
Checksum:i529CA4EBB3AC544D
GO

Genome annotation databases

EnsembliENSTRUT00000038130; ENSTRUP00000037994; ENSTRUG00000014871

Similar proteinsi

Entry informationi

Entry nameiH2UM23_TAKRU
AccessioniPrimary (citable) accession number: H2UM23
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: June 20, 2018
This is version 49 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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