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Protein
Submitted name:

TUBB6 isoform 4

Gene

TUBB6

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
TUBB6 isoform 4Imported
Submitted name:
Tubulin beta 6 class VImported
Gene namesi
Name:TUBB6Imported
ORF Names:CK820_G0042845Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 18

Organism-specific databases

VGNCiVGNC:10010 TUBB6

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiH2RIK6

Expressioni

Gene expression databases

BgeeiENSPTRG00000009879 Expressed in 6 organ(s), highest expression level in heart

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000061365

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini3 – 93TubulinInterPro annotationAdd BLAST91

Phylogenomic databases

eggNOGiKOG0731 Eukaryota
COG0465 LUCA
GeneTreeiENSGT00760000119061
InParanoidiH2RIK6
OMAiSREITWQ
OrthoDBiEOG091G03EQ
TreeFamiTF105004

Family and domain databases

Gene3Di3.40.50.1440, 1 hit
InterProiView protein in InterPro
IPR013838 Beta-tubulin_BS
IPR002453 Beta_tubulin
IPR000217 Tubulin
IPR036525 Tubulin/FtsZ_GTPase_sf
IPR003008 Tubulin_FtsZ_GTPase
PANTHERiPTHR11588 PTHR11588, 1 hit
PfamiView protein in Pfam
PF00091 Tubulin, 1 hit
PRINTSiPR01163 BETATUBULIN
PR01161 TUBULIN
SUPFAMiSSF52490 SSF52490, 1 hit
PROSITEiView protein in PROSITE
PS00228 TUBULIN_B_AUTOREG, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 5 potential isoforms that are computationally mapped.Show allAlign All

H2RIK6-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MREIVHIQAG QCGNQIGTKF WEVISDEHGI DPAGGYVGDS ALQLERINVY
60 70 80 90 100
YNESSSQKYV PRAALVDLEP GTMDSVRSGP FGQLFRPDNF IFAHLHRGTE

EKQE
Length:104
Mass (Da):11,652
Last modified:February 28, 2018 - v2
Checksum:iE47DCE7E06248B39
GO

Computationally mapped potential isoform sequencesi

There are 5 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
H2QEA0H2QEA0_PANTR
Tubulin beta chain
TUBB6 CK820_G0042845
446Annotation score:
H2RB52H2RB52_PANTR
Tubulin beta chain
TUBB6
548Annotation score:
A0A2I3TX63A0A2I3TX63_PANTR
TUBB6 isoform 10
TUBB6 CK820_G0042845
104Annotation score:
A0A2I3TJA6A0A2I3TJA6_PANTR
TUBB6 isoform 12
TUBB6 CK820_G0042845
136Annotation score:
A0A2I3SZ36A0A2I3SZ36_PANTR
TUBB6 isoform 11
TUBB6 CK820_G0042845
115Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04060034 Genomic DNA No translation available.
AACZ04060035 Genomic DNA No translation available.
AACZ04060036 Genomic DNA No translation available.
NBAG03000406 Genomic DNA Translation: PNI28247.1
RefSeqiXP_016788768.1, XM_016933279.1

Genome annotation databases

EnsembliENSPTRT00000073478; ENSPTRP00000061365; ENSPTRG00000009878
GeneIDi455508

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04060034 Genomic DNA No translation available.
AACZ04060035 Genomic DNA No translation available.
AACZ04060036 Genomic DNA No translation available.
NBAG03000406 Genomic DNA Translation: PNI28247.1
RefSeqiXP_016788768.1, XM_016933279.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000061365

Proteomic databases

PaxDbiH2RIK6

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000073478; ENSPTRP00000061365; ENSPTRG00000009878
GeneIDi455508

Organism-specific databases

CTDi84617
VGNCiVGNC:10010 TUBB6

Phylogenomic databases

eggNOGiKOG0731 Eukaryota
COG0465 LUCA
GeneTreeiENSGT00760000119061
InParanoidiH2RIK6
OMAiSREITWQ
OrthoDBiEOG091G03EQ
TreeFamiTF105004

Gene expression databases

BgeeiENSPTRG00000009879 Expressed in 6 organ(s), highest expression level in heart

Family and domain databases

Gene3Di3.40.50.1440, 1 hit
InterProiView protein in InterPro
IPR013838 Beta-tubulin_BS
IPR002453 Beta_tubulin
IPR000217 Tubulin
IPR036525 Tubulin/FtsZ_GTPase_sf
IPR003008 Tubulin_FtsZ_GTPase
PANTHERiPTHR11588 PTHR11588, 1 hit
PfamiView protein in Pfam
PF00091 Tubulin, 1 hit
PRINTSiPR01163 BETATUBULIN
PR01161 TUBULIN
SUPFAMiSSF52490 SSF52490, 1 hit
PROSITEiView protein in PROSITE
PS00228 TUBULIN_B_AUTOREG, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH2RIK6_PANTR
AccessioniPrimary (citable) accession number: H2RIK6
Secondary accession number(s): A0A2J8JZR7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: February 28, 2018
Last modified: September 12, 2018
This is version 43 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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