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Protein
Submitted name:

Thrombospondin type 1 domain containing 7B

Gene

THSD7B

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Names & Taxonomyi

Protein namesi
Submitted name:
Thrombospondin type 1 domain containing 7BImported
Gene namesi
Name:THSD7BImported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 2B

Organism-specific databases

VGNCiVGNC:2880 THSD7B

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei1556 – 1580HelicalSequence analysisAdd BLAST25

Keywords - Cellular componenti

Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 36Sequence analysisAdd BLAST36
ChainiPRO_501413138837 – 1606Sequence analysisAdd BLAST1570

Proteomic databases

PaxDbiH2R6I9

Expressioni

Gene expression databases

BgeeiENSPTRG00000012502 Expressed in 4 organ(s), highest expression level in heart

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000049156

Family & Domainsi

Keywords - Domaini

SignalSequence analysis, Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3538 Eukaryota
KOG3539 Eukaryota
ENOG410XR0P LUCA
GeneTreeiENSGT00930000150896
InParanoidiH2R6I9
OMAiWSPCKIN
OrthoDBiEOG091G00BM
TreeFamiTF329791

Family and domain databases

Gene3Di2.20.100.10, 10 hits
InterProiView protein in InterPro
IPR000884 TSP1_rpt
IPR036383 TSP1_rpt_sf
PfamiView protein in Pfam
PF00090 TSP_1, 8 hits
SMARTiView protein in SMART
SM00209 TSP1, 16 hits
SUPFAMiSSF82895 SSF82895, 12 hits
PROSITEiView protein in PROSITE
PS50092 TSP1, 13 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

H2R6I9-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFPKSNLTVT CWVWRSMRKL FLLLSLLLSH AAHLEGKKDN QFIWKPGPWG
60 70 80 90 100
RCTGDCGPGG VQSRAVWCFH VDGWTSHLSN CGESNRPPKE RSCFRVCDWH
110 120 130 140 150
SDLFQWEVSD WHHCVLVPYA RGEVKPRIAE CVTAQHGLQH RMVRCIQKLN
160 170 180 190 200
RTVVANEICE HFAPQPPTEQ ACLIPCPRDC VVSEFLPWSN CSKGCGKKLQ
210 220 230 240 250
HRTRAVIAPP LFGGLQCPNL TESRACDASI SCPLGEEEYT FSLKVGPWSK
260 270 280 290 300
CRLPHLKEIN PSGRTVLDFN SDSNERVTFK HQSYKAHHHS KSWAIEIGYQ
310 320 330 340 350
TRQVSCTRSD GQNAMLSLCL QDSFPLTVQS CIMPKDCETS QWSSWSPCSK
360 370 380 390 400
TCRSGSLLPG FRSRSRNVKH MAIGGGKECP ELLEKEACIV EGELRQQCPR
410 420 430 440 450
YSWRTSEWKE CQVSLLLEQQ DPHWHVTGPV CGGGIQTREV YCAQSVPAAA
460 470 480 490 500
ALRAKEVSRP VEKTLCMGPT PLPSQLCNIP CSTDCIVSSW SAWGLCIHEN
510 520 530 540 550
CRDPQGKKGF RTRQRHVLME STGPAGHCPH LVESVPCEDP MCYRWLASEG
560 570 580 590 600
ICFPDHGKCG LGHRILKAVC QNDRGEDVSG SLCPVPPPPE RKACEIPCRM
610 620 630 640 650
DCVLSEWTEW SSCSQSCSNK NSDGKQTRSR TILALAGEGG KPCPPSQALQ
660 670 680 690 700
EHRLCNDHSC MQLHWETSPW GPCSEDTLVT ALNATIGWNG EATCGVGIQT
710 720 730 740 750
RRVFCVKSHV GQVMTKRCPD STRPETVRPC FLPCKKDCIV TAFSEWTPCP
760 770 780 790 800
RMCQAGNATV KQSRYRIIIQ EAANGGQECP DTLYEERECE DVSLCPVYRW
810 820 830 840 850
KPQKWSPCIL VPESVWQGIT GSSEACGKGL QTRAVSCISD DNRSAEMMEC
860 870 880 890 900
LKQTNGMPLL VQECTVPCRE DCTFTAWSKF TPCSTNCEAT KSRRRQLTGK
910 920 930 940 950
SRKKEKCQDA DLYPLVETEL CPCDEFISQP YGNWSDCILP EGRREPHRGL
960 970 980 990 1000
RVQGDSKECG EGLRFRAVAC SDKNGRPVDP SFCSSSGYIQ EKCVIPCPFD
1010 1020 1030 1040 1050
CKLSDWSSWG SCSSSCGIGV RIRSKWLKEK PYNGGRPCPK LDLKNQVHEA
1060 1070 1080 1090 1100
VPCYSECNQY SWVVEHWSSC KINNELRSLR CGGGTQSRKI RCVNTADGEG
1110 1120 1130 1140 1150
GAVDSNLCNQ DEIPPETQSC SLMCPNECVM SEWGLWSKCP QSCDPHTMQR
1160 1170 1180 1190 1200
RTRHLLRPSL NSRTCAEDSQ VQPCLLNENC FQFQYNLTEW STCQLSENAP
1210 1220 1230 1240 1250
CGQGVRTRLL SCVRSDGKPV SVDQCEQHNL EKPQRMSIPC LVECVVNCQL
1260 1270 1280 1290 1300
SGWTAWTECS QTCGHGGRMS RTRFIIMPTQ GEGRPCPTEL TQQKTCPVTP
1310 1320 1330 1340 1350
CYSWVLGNWS ACKLEGGDCG EGVQIRSLSC MVHNGSISHA AGRVEDALCG
1360 1370 1380 1390 1400
EMPFQDSILK QLCSVPCPGD CHLTEWSEWS TCELTCIDGR SFETVGRQSR
1410 1420 1430 1440 1450
SRTFIIQSFE NQDSCPQQVL ETRPCTGGKC YHYTWKASLW NNNERTVWCQ
1460 1470 1480 1490 1500
RSDGVNVTGG CSPQARPAAI RQCIPACRKP FSYCTQGGVC GCEKGYTEIM
1510 1520 1530 1540 1550
RSNGFLDYCM KVPGSEDKKA DVKNLSGKNR PVNSKIHDIF KGWSLQPLDP
1560 1570 1580 1590 1600
DGRVKIWVYG VSGGAFLIMI FLIFTSYLVC KKPKPHQSTP PQQKPLTLAY

DGDLDM
Length:1,606
Mass (Da):179,368
Last modified:February 28, 2018 - v2
Checksum:i8C5A2A1335EC4C66
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3RLB1A0A2I3RLB1_PANTR
Thrombospondin type 1 domain contai...
THSD7B
1,541Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04058343 Genomic DNA No translation available.
AACZ04058344 Genomic DNA No translation available.
AACZ04058345 Genomic DNA No translation available.
AACZ04058346 Genomic DNA No translation available.
AACZ04058347 Genomic DNA No translation available.
AACZ04058348 Genomic DNA No translation available.
RefSeqiXP_009441664.1, XM_009443389.1

Genome annotation databases

EnsembliENSPTRT00000023194; ENSPTRP00000049156; ENSPTRG00000012502
GeneIDi459637
KEGGiptr:459637

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04058343 Genomic DNA No translation available.
AACZ04058344 Genomic DNA No translation available.
AACZ04058345 Genomic DNA No translation available.
AACZ04058346 Genomic DNA No translation available.
AACZ04058347 Genomic DNA No translation available.
AACZ04058348 Genomic DNA No translation available.
RefSeqiXP_009441664.1, XM_009443389.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000049156

Proteomic databases

PaxDbiH2R6I9

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000023194; ENSPTRP00000049156; ENSPTRG00000012502
GeneIDi459637
KEGGiptr:459637

Organism-specific databases

CTDi80731
VGNCiVGNC:2880 THSD7B

Phylogenomic databases

eggNOGiKOG3538 Eukaryota
KOG3539 Eukaryota
ENOG410XR0P LUCA
GeneTreeiENSGT00930000150896
InParanoidiH2R6I9
OMAiWSPCKIN
OrthoDBiEOG091G00BM
TreeFamiTF329791

Gene expression databases

BgeeiENSPTRG00000012502 Expressed in 4 organ(s), highest expression level in heart

Family and domain databases

Gene3Di2.20.100.10, 10 hits
InterProiView protein in InterPro
IPR000884 TSP1_rpt
IPR036383 TSP1_rpt_sf
PfamiView protein in Pfam
PF00090 TSP_1, 8 hits
SMARTiView protein in SMART
SM00209 TSP1, 16 hits
SUPFAMiSSF82895 SSF82895, 12 hits
PROSITEiView protein in PROSITE
PS50092 TSP1, 13 hits
ProtoNetiSearch...

Entry informationi

Entry nameiH2R6I9_PANTR
AccessioniPrimary (citable) accession number: H2R6I9
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: February 28, 2018
Last modified: November 7, 2018
This is version 31 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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