UniProtKB - H2QVH0 (H2QVH0_PANTR)
Protein
Submitted name:
LUC7-like 2
Gene
FMC1-LUC7L2
Organism
Pan troglodytes (Chimpanzee)
Status
Functioni
GO - Molecular functioni
- mRNA binding Source: InterPro
GO - Biological processi
- mRNA splice site selection Source: InterPro
Names & Taxonomyi
Protein namesi | Submitted name: LUC7-like 2Imported |
Gene namesi | Name:FMC1-LUC7L2Imported Synonyms:LUC7L2Imported |
Organismi | Pan troglodytes (Chimpanzee)Imported |
Taxonomic identifieri | 9598 [NCBI] |
Taxonomic lineagei | Eukaryota › Metazoa › Chordata › Craniata › Vertebrata › Euteleostomi › Mammalia › Eutheria › Euarchontoglires › Primates › Haplorrhini › Catarrhini › Hominidae › Pan |
Proteomesi |
|
Subcellular locationi
Nucleus
- U1 snRNP Source: InterPro
Expressioni
Gene expression databases
Bgeei | ENSPTRG00000019755, Expressed in cerebellum and 7 other tissues |
Family & Domainsi
Region
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Regioni | 235 – 392 | DisorderedSequence analysisAdd BLAST | 158 |
Coiled coil
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Coiled coili | 94 – 146 | Sequence analysisAdd BLAST | 53 | |
Coiled coili | 149 – 172 | Sequence analysisAdd BLAST | 24 |
Compositional bias
Feature key | Position(s) | DescriptionActions | Graphical view | Length |
---|---|---|---|---|
Compositional biasi | 235 – 261 | PolyampholyteSequence analysisAdd BLAST | 27 | |
Compositional biasi | 262 – 328 | BasicSequence analysisAdd BLAST | 67 | |
Compositional biasi | 329 – 392 | PolyampholyteSequence analysisAdd BLAST | 64 |
Sequence similaritiesi
Belongs to the Luc7 family.ARBA annotation
Keywords - Domaini
Coiled coilSequence analysisPhylogenomic databases
eggNOGi | KOG0796, Eukaryota |
GeneTreei | ENSGT00950000183213 |
HOGENOMi | CLU_030397_3_0_1 |
OMAi | NHFRDGG |
OrthoDBi | 1499212at2759 |
TreeFami | TF317607 |
Family and domain databases
InterProi | View protein in InterPro IPR004882, Luc7-rel |
PANTHERi | PTHR12375, PTHR12375, 1 hit |
Pfami | View protein in Pfam PF03194, LUC7, 1 hit |
(1+)i Sequence
Sequence statusi: Complete.
This entry has 1 described isoform and 4 potential isoforms that are computationally mapped.Show allAlign All
H2QVH0-1 [UniParc]FASTAAdd to basket
10 20 30 40 50
MSAQAQMRAM LDQLMGTSRD GDTTRQRIKF SDDRVCKSHL LNCCPHDVLS
60 70 80 90 100
GTRMDLGECL KVHDLALRAD YEIASKEQDF FFELDAMDHL QSFIADCDRR
110 120 130 140 150
TEVAKKRLAE TQEEISAEVA AKAERVHELN EEIGKLLAKV EQLGAEGNVE
160 170 180 190 200
ESQKVMDEVE KARAKKREAE EVYRNSMPAS SFQQQKLRVC EVCSAYLGLH
210 220 230 240 250
DNDRRLADHF GGKLHLGFIE IREKLEELKR VVAEKQEKRN QERLKRREER
260 270 280 290 300
EREEREKLRR SRSHSKNPKR SRSREHRRHR SRSMSRERKR RTRSKSREKR
310 320 330 340 350
HRHRSRSSSR SRSRSHQRSR HSSRDRSRER SKRRSSKERF RDQDLASCDR
360 370 380 390
DRSSRDRSPR DRDRKDKKRS YESANGRSED RRSSEEREAG EI
Computationally mapped potential isoform sequencesi
There are 4 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basketH2QVG9 | H2QVG9_PANTR | Uncharacterized protein | FMC1-LUC7L2 | 454 | Annotation score: | ||
A0A2I3SIC4 | A0A2I3SIC4_PANTR | Uncharacterized protein | FMC1-LUC7L2 | 391 | Annotation score: | ||
A0A2I3RHT0 | A0A2I3RHT0_PANTR | Uncharacterized protein | FMC1-LUC7L2 | 389 | Annotation score: | ||
A0A2I3RKF9 | A0A2I3RKF9_PANTR | Uncharacterized protein | FMC1-LUC7L2 | 381 | Annotation score: |
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC187520 Genomic DNA No translation available. AC192730 Genomic DNA No translation available. GABC01007173 mRNA Translation: JAA04165.1 GABF01008375 mRNA Translation: JAA13770.1 GABD01001022 mRNA Translation: JAA32078.1 GABE01005553 mRNA Translation: JAA39186.1 |
RefSeqi | XP_001151307.1, XM_001151307.4 |
Genome annotation databases
Ensembli | ENSPTRT00000036601; ENSPTRP00000033842; ENSPTRG00000019755 |
GeneIDi | 739990 |
Similar proteinsi
Cross-referencesi
Sequence databases
Select the link destinations: EMBLi GenBanki DDBJi Links Updated | AC187520 Genomic DNA No translation available. AC192730 Genomic DNA No translation available. GABC01007173 mRNA Translation: JAA04165.1 GABF01008375 mRNA Translation: JAA13770.1 GABD01001022 mRNA Translation: JAA32078.1 GABE01005553 mRNA Translation: JAA39186.1 |
RefSeqi | XP_001151307.1, XM_001151307.4 |
3D structure databases
SMRi | H2QVH0 |
ModBasei | Search... |
Protein-protein interaction databases
STRINGi | 9598.ENSPTRP00000033842 |
Genome annotation databases
Ensembli | ENSPTRT00000036601; ENSPTRP00000033842; ENSPTRG00000019755 |
GeneIDi | 739990 |
Phylogenomic databases
eggNOGi | KOG0796, Eukaryota |
GeneTreei | ENSGT00950000183213 |
HOGENOMi | CLU_030397_3_0_1 |
OMAi | NHFRDGG |
OrthoDBi | 1499212at2759 |
TreeFami | TF317607 |
Gene expression databases
Bgeei | ENSPTRG00000019755, Expressed in cerebellum and 7 other tissues |
Family and domain databases
InterProi | View protein in InterPro IPR004882, Luc7-rel |
PANTHERi | PTHR12375, PTHR12375, 1 hit |
Pfami | View protein in Pfam PF03194, LUC7, 1 hit |
ProtoNeti | Search... |
MobiDBi | Search... |
Entry informationi
Entry namei | H2QVH0_PANTR | |
Accessioni | H2QVH0Primary (citable) accession number: H2QVH0 | |
Entry historyi | Integrated into UniProtKB/TrEMBL: | March 21, 2012 |
Last sequence update: | March 21, 2012 | |
Last modified: | October 7, 2020 | |
This is version 61 of the entry and version 1 of the sequence. See complete history. | ||
Entry statusi | Unreviewed (UniProtKB/TrEMBL) |