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Protein
Submitted name:

TWIST neighbor

Gene

TWISTNB

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
TWIST neighborImported
Gene namesi
Name:TWISTNBImported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 7

Organism-specific databases

VGNCiVGNC:4554 TWISTNB

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSPTRG00000018962 Expressed in 6 organ(s), highest expression level in heart

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000032393

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini55 – 123SHS2_Rpb7-NInterPro annotationAdd BLAST69

Phylogenomic databases

eggNOGiKOG4134 Eukaryota
ENOG4111JD4 LUCA
GeneTreeiENSGT00390000005553
KOiK03004
OMAiWEEEPKK
OrthoDBiEOG091G0JWK
TreeFamiTF325602

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
PfamiView protein in Pfam
PF03876 SHS2_Rpb7-N, 1 hit

Sequencei

Sequence statusi: Complete.

H2QU84-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAAGCSEAPR PAAASDGSLV GQAGVLPCLE LPTYAAACAL VNSRYSCLVA
60 70 80 90 100
GPHQRHIALS PRYLNRKRTG IREQLDAELL RYSESLLGVP IAYDNIKVVG
110 120 130 140 150
ELGDIYDDQG HIHLNIEADF VIFCPEPGQK LMGIVNKVSS SHIGCLVHGC
160 170 180 190 200
FNASIPKPEQ LSAEQWQTME INMGDELEFE VFRLDSDAAG VFCIRGKLNI
210 220 230 240 250
TSLQFKRSEV SEEVTENGTE EAAKKPKKKK KKKDPETYEV DSGTTKLADD
260 270 280 290 300
ADDTPMEESA LQNTNNVNGI WEEEPKKKKK KKKHQEVQDQ DPVFQGSDSS
310 320 330
GYQSDHKKKK KKRKHSEEAE FTPPLKCSPK RKGKSNFL
Length:338
Mass (Da):37,460
Last modified:March 21, 2012 - v1
Checksum:i64289007FFE5D243
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04068668 Genomic DNA No translation available.
GABC01010615 mRNA Translation: JAA00723.1
GABF01002231 mRNA Translation: JAA19914.1
GABE01002144 mRNA Translation: JAA42595.1
RefSeqiXP_519541.3, XM_519541.4

Genome annotation databases

EnsembliENSPTRT00000035050; ENSPTRP00000032393; ENSPTRG00000018962
GeneIDi463911
KEGGiptr:463911

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04068668 Genomic DNA No translation available.
GABC01010615 mRNA Translation: JAA00723.1
GABF01002231 mRNA Translation: JAA19914.1
GABE01002144 mRNA Translation: JAA42595.1
RefSeqiXP_519541.3, XM_519541.4

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000032393

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000035050; ENSPTRP00000032393; ENSPTRG00000018962
GeneIDi463911
KEGGiptr:463911

Organism-specific databases

CTDi221830
VGNCiVGNC:4554 TWISTNB

Phylogenomic databases

eggNOGiKOG4134 Eukaryota
ENOG4111JD4 LUCA
GeneTreeiENSGT00390000005553
KOiK03004
OMAiWEEEPKK
OrthoDBiEOG091G0JWK
TreeFamiTF325602

Gene expression databases

BgeeiENSPTRG00000018962 Expressed in 6 organ(s), highest expression level in heart

Family and domain databases

Gene3Di3.30.1490.120, 1 hit
InterProiView protein in InterPro
IPR036898 RNA_pol_Rpb7-like_N_sf
IPR005576 RNA_pol_Rpb7_N
PfamiView protein in Pfam
PF03876 SHS2_Rpb7-N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH2QU84_PANTR
AccessioniPrimary (citable) accession number: H2QU84
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: October 10, 2018
This is version 35 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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