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Protein
Submitted name:

CPEB4 isoform 1

Gene

CPEB4

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
CPEB4 isoform 1Imported
Submitted name:
Cytoplasmic polyadenylation element binding protein 4Imported
Gene namesi
Name:CPEB4Imported
ORF Names:CK820_G0025717Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 5

Organism-specific databases

VGNCiVGNC:54158 CPEB4

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Proteomic databases

PaxDbiH2QS14

Expressioni

Gene expression databases

BgeeiENSPTRG00000017545 Expressed in 6 organ(s), highest expression level in heart

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000029965

Structurei

3D structure databases

SMRiH2QS14
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini472 – 559RRMInterPro annotationAdd BLAST88
Domaini580 – 658RRMInterPro annotationAdd BLAST79

Phylogenomic databases

eggNOGiENOG410ITXB Eukaryota
ENOG410YHXZ LUCA
GeneTreeiENSGT00390000012886
InParanoidiH2QS14
OMAiSFDSFNM
OrthoDBiEOG091G0AO9
TreeFamiTF317658

Family and domain databases

Gene3Di3.30.40.130, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR032296 CEBP_ZZ
IPR038446 CEBP_ZZ_sf
IPR034819 CPEB
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PANTHERiPTHR12566 PTHR12566, 1 hit
PfamiView protein in Pfam
PF16366 CEBP_ZZ, 1 hit
PF16367 RRM_7, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

H2QS14-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MGDYGFGVLV QSNTGNKSAF PVRFHPHLQP PHHHQNATPS PAAFINNNTA
60 70 80 90 100
ANGSSAGSAW LFPAPATHNI QDEILGSEKA KSQQQEQQDP LEKQQLSPSP
110 120 130 140 150
GQEAGILPET EKAKSEENQG DNSSENGNGK EKIRIESPVL TGFDYQEATG
160 170 180 190 200
LGTSTQPLTS SASSLTGFSN WSAAIAPSSS TIINEDASFF HQGGVPAASA
210 220 230 240 250
NNGALLFQNF PHHVSPGFGG SFSPQIGPLS QHHPHHPHFQ HHHSQHQQQR
260 270 280 290 300
RSPASPHPPP FTHRNAAFNQ LPHLANNLNK PPSPWSSYQS PSPTPSSSWS
310 320 330 340 350
PGGGGYGGWG GSQGRDHRRG LNGGITPLNS ISPLKKNFAS NHIQLQKYAR
360 370 380 390 400
PSSAFAPKSW MEDSLNRADN IFPFPDRPRT FDMHSLESSL IDIMRAENDT
410 420 430 440 450
IKGRLNYSYP GSDSSLLINA RTYGRRRGQS SLFPMEDGFL DDGRGDQPLH
460 470 480 490 500
SGLGSPHCFS HQNGERVERY SRKVFVGGLP PDIDEDEITA SFRRFGPLIV
510 520 530 540 550
DWPHKAESKS YFPPKGYAFL LFQDESSVQA LIDACIEEDG KLYLCVSSPT
560 570 580 590 600
IKDKPVQIRP WNLSDSDFVM DGSQPLDPRK TIFVGGVPRP LRAVELAMIM
610 620 630 640 650
DRLYGGVCYA GIDTDPELKY PKGAGRVAFS NQQSYIAAIS ARFVQLQHGE
660 670 680 690 700
IDKRVEVKPY VLDDQLCDEC QGARCGGKFA PFFCANVTCL QYYCEYCWAA
710 720
IHSRAGREFH KPLVKEGGDR PRHISFRWN
Length:729
Mass (Da):80,152
Last modified:February 28, 2018 - v2
Checksum:iB71AAB0650E8CB13
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3S8G5A0A2I3S8G5_PANTR
CPEB4 isoform 6
CPEB4 CK820_G0025717
704Annotation score:
A0A2I3SS90A0A2I3SS90_PANTR
CPEB4 isoform 2
CPEB4 CK820_G0025717
712Annotation score:
K7DR84K7DR84_PANTR
Cytoplasmic polyadenylation element...
CPEB4
721Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04058957 Genomic DNA No translation available.
NBAG03000276 Genomic DNA Translation: PNI52035.1
RefSeqiXP_001155432.1, XM_001155432.4

Genome annotation databases

EnsembliENSPTRT00000032430; ENSPTRP00000029965; ENSPTRG00000017545
GeneIDi462277

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04058957 Genomic DNA No translation available.
NBAG03000276 Genomic DNA Translation: PNI52035.1
RefSeqiXP_001155432.1, XM_001155432.4

3D structure databases

SMRiH2QS14
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000029965

Proteomic databases

PaxDbiH2QS14

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000032430; ENSPTRP00000029965; ENSPTRG00000017545
GeneIDi462277

Organism-specific databases

CTDi80315
VGNCiVGNC:54158 CPEB4

Phylogenomic databases

eggNOGiENOG410ITXB Eukaryota
ENOG410YHXZ LUCA
GeneTreeiENSGT00390000012886
InParanoidiH2QS14
OMAiSFDSFNM
OrthoDBiEOG091G0AO9
TreeFamiTF317658

Gene expression databases

BgeeiENSPTRG00000017545 Expressed in 6 organ(s), highest expression level in heart

Family and domain databases

Gene3Di3.30.40.130, 1 hit
3.30.70.330, 2 hits
InterProiView protein in InterPro
IPR032296 CEBP_ZZ
IPR038446 CEBP_ZZ_sf
IPR034819 CPEB
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
PANTHERiPTHR12566 PTHR12566, 1 hit
PfamiView protein in Pfam
PF16366 CEBP_ZZ, 1 hit
PF16367 RRM_7, 1 hit
SMARTiView protein in SMART
SM00360 RRM, 2 hits
SUPFAMiSSF54928 SSF54928, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 2 hits
ProtoNetiSearch...

Entry informationi

Entry nameiH2QS14_PANTR
AccessioniPrimary (citable) accession number: H2QS14
Secondary accession number(s): A0A2J8LXM7
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: February 28, 2018
Last modified: November 7, 2018
This is version 36 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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