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Protein
Submitted name:

Non-SMC condensin II complex subunit H2

Gene

NCAPH2

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

  • chromatin binding Source: GO_Central

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Non-SMC condensin II complex subunit H2Imported
Gene namesi
Name:NCAPH2Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 22

Organism-specific databases

VGNCiVGNC:5285 NCAPH2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

BgeeiENSPTRG00000014545 Expressed in 6 organ(s), highest expression level in cerebellum

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000025078

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini11 – 123CNDH2_NInterPro annotationAdd BLAST113
Domaini148 – 261CNDH2_MInterPro annotationAdd BLAST114
Domaini316 – 596CNDH2_CInterPro annotationAdd BLAST281

Phylogenomic databases

eggNOGiKOG2359 Eukaryota
ENOG4111BR3 LUCA
GeneTreeiENSGT00390000014443
KOiK11490
OMAiFHVRLIG
OrthoDBiEOG091G0TAX
TreeFamiTF101164

Family and domain databases

InterProiView protein in InterPro
IPR031737 CNDH2_C
IPR031719 H2_M
IPR009378 H2_N
IPR031739 Ncaph2
PANTHERiPTHR14324 PTHR14324, 1 hit
PfamiView protein in Pfam
PF16858 CNDH2_C, 1 hit
PF16869 CNDH2_M, 1 hit
PF06278 CNDH2_N, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 2 potential isoforms that are computationally mapped.Show allAlign All

H2QLY1-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MEDVEARFAH LLQPIRDLTK NWEVDVAAQL GEYLEELDQI CISFDEGKTT
60 70 80 90 100
MNFIEAALLI QGSACVYSKK VEYLYSLVYQ ALDFISGKRR AKQLSSVQED
110 120 130 140 150
RANGVASSGV PQEAENEFLS LDDFPDSRTN VDLKNDQTPS EVLIIPLLPM
160 170 180 190 200
ALVAPDEMEK NNNPLYSRQG EVLASRKDFR MNTCVPHPRG AFMLEPEGMS
210 220 230 240 250
PMEPAGVSPM PGTQKDAGRT EEQPMEVSVC RSPVPALGFS QEPGPSPEGP
260 270 280 290 300
MPLGGGEDED AEEAVELPEA SAPKAALEPK ESRSPQQSAA LPSRYMLRER
310 320 330 340 350
EGAPEPASCV KETPDPWQSL DPFDSLESKP FKKGRPYSVP PCVEEAMGQK
360 370 380 390 400
RKRKGAAKLQ DFHQWYLAAY ADHADSRRLR RKGPSFADME VLYWTHVKEQ
410 420 430 440 450
LETLRKLQRR EVAEQWLRPA EEDHLEDSLE DLGAAADDFL EPEEYVEPEG
460 470 480 490 500
ADPREAADFD AVPMSLSYEE LVRRNVELFI ATSQKFVQET ELSQRIRDWE
510 520 530 540 550
DTVQPLLQEQ EQHVPFDIHT YGDQLVSRFP QLNEWCSFAE LVAGQPAFEV
560 570 580 590 600
CRSMLASLQL ANDYTVEITQ QPGLEMAVDT MSLRLLTHQR AHKRFQTYAA

PSMAQP
Length:606
Mass (Da):68,209
Last modified:February 28, 2018 - v2
Checksum:i3F26D39BC256C8E5
GO

Computationally mapped potential isoform sequencesi

There are 2 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3SGU8A0A2I3SGU8_PANTR
NCAPH2 isoform 10
NCAPH2 CK820_G0049025
62Annotation score:
A0A2I3S8Z3A0A2I3S8Z3_PANTR
Non-SMC condensin II complex subuni...
NCAPH2
586Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04061631 Genomic DNA No translation available.
RefSeqiXP_001142278.1, XM_001142278.4

Genome annotation databases

EnsembliENSPTRT00000027199; ENSPTRP00000025078; ENSPTRG00000014545
GeneIDi458939
KEGGiptr:458939

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04061631 Genomic DNA No translation available.
RefSeqiXP_001142278.1, XM_001142278.4

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000025078

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000027199; ENSPTRP00000025078; ENSPTRG00000014545
GeneIDi458939
KEGGiptr:458939

Organism-specific databases

CTDi29781
VGNCiVGNC:5285 NCAPH2

Phylogenomic databases

eggNOGiKOG2359 Eukaryota
ENOG4111BR3 LUCA
GeneTreeiENSGT00390000014443
KOiK11490
OMAiFHVRLIG
OrthoDBiEOG091G0TAX
TreeFamiTF101164

Gene expression databases

BgeeiENSPTRG00000014545 Expressed in 6 organ(s), highest expression level in cerebellum

Family and domain databases

InterProiView protein in InterPro
IPR031737 CNDH2_C
IPR031719 H2_M
IPR009378 H2_N
IPR031739 Ncaph2
PANTHERiPTHR14324 PTHR14324, 1 hit
PfamiView protein in Pfam
PF16858 CNDH2_C, 1 hit
PF16869 CNDH2_M, 1 hit
PF06278 CNDH2_N, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH2QLY1_PANTR
AccessioniPrimary (citable) accession number: H2QLY1
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: February 28, 2018
Last modified: November 7, 2018
This is version 39 of the entry and version 2 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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