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Protein
Submitted name:

Transmembrane protein 41B

Gene

TMEM41B

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Transmembrane protein 41BImported
Gene namesi
Name:TMEM41BImported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 11

Organism-specific databases

VGNCiVGNC:968 TMEM41B

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei52 – 72HelicalSequence analysisAdd BLAST21
Transmembranei109 – 135HelicalSequence analysisAdd BLAST27
Transmembranei147 – 170HelicalSequence analysisAdd BLAST24
Transmembranei197 – 216HelicalSequence analysisAdd BLAST20
Transmembranei228 – 249HelicalSequence analysisAdd BLAST22
Transmembranei261 – 282HelicalSequence analysisAdd BLAST22

Keywords - Cellular componenti

Membrane

Expressioni

Gene expression databases

BgeeiENSPTRG00000003346 Expressed in 6 organ(s), highest expression level in liver

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000005845

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiKOG3140 Eukaryota
COG0398 LUCA
GeneTreeiENSGT00520000055582
OMAiILPVCFQ
OrthoDBiEOG091G0ONT
TreeFamiTF314301

Family and domain databases

InterProiView protein in InterPro
IPR032816 SNARE_assoc
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 1 potential isoform that is computationally mapped.Show allAlign All

H2Q360-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MAKGRVAERS QLGAHHTTPV GDGAAGTRGL AAPGSRDHQK EKSWAEAGSA
60 70 80 90 100
RMSLLILVSI FLSAAFVMFL VYKNFPQLSE EERVNMKVPR DMDDAKALGK
110 120 130 140 150
VLSKYKDTFY VQVLVAYFAT YIFLQTFAIP GSIFLSILSG FLYPFPLALF
160 170 180 190 200
LVCLCSGLGA SFCYMLSYLV GRPVVYKYLT EKAVKWSQQV ERHREHLINY
210 220 230 240 250
IIFLRITPFL PNWFINITSP VINVPLKVFF IGTFLGVAPP SFVAIKAGTT
260 270 280 290
LYQLTTAGEA VSWNSIFILM ILAVLSILPA IFQKKLKQKF E
Length:291
Mass (Da):32,485
Last modified:March 21, 2012 - v1
Checksum:i1782F3BF1698CBB1
GO

Computationally mapped potential isoform sequencesi

There is 1 potential isoform mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
A0A2I3TFT7A0A2I3TFT7_PANTR
Transmembrane protein 41B
TMEM41B
196Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC192839 Genomic DNA No translation available.
GABF01009054 mRNA Translation: JAA13091.1
RefSeqiXP_003312961.1, XM_003312913.3

Genome annotation databases

EnsembliENSPTRT00000006337; ENSPTRP00000005845; ENSPTRG00000003346
GeneIDi100612824
KEGGiptr:100612824

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC192839 Genomic DNA No translation available.
GABF01009054 mRNA Translation: JAA13091.1
RefSeqiXP_003312961.1, XM_003312913.3

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000005845

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSPTRT00000006337; ENSPTRP00000005845; ENSPTRG00000003346
GeneIDi100612824
KEGGiptr:100612824

Organism-specific databases

CTDi440026
VGNCiVGNC:968 TMEM41B

Phylogenomic databases

eggNOGiKOG3140 Eukaryota
COG0398 LUCA
GeneTreeiENSGT00520000055582
OMAiILPVCFQ
OrthoDBiEOG091G0ONT
TreeFamiTF314301

Gene expression databases

BgeeiENSPTRG00000003346 Expressed in 6 organ(s), highest expression level in liver

Family and domain databases

InterProiView protein in InterPro
IPR032816 SNARE_assoc
PfamiView protein in Pfam
PF09335 SNARE_assoc, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH2Q360_PANTR
AccessioniPrimary (citable) accession number: H2Q360
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: November 7, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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