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Protein
Submitted name:

TDRD5 isoform 4

Gene

TDRD5

Organism
Pan troglodytes (Chimpanzee)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
TDRD5 isoform 4Imported
Submitted name:
Tudor domain containing 5Imported
Gene namesi
Name:TDRD5Imported
ORF Names:CK820_G0013639Imported
OrganismiPan troglodytes (Chimpanzee)Imported
Taxonomic identifieri9598 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaePan
Proteomesi
  • UP000002277 Componenti: Chromosome 1

Organism-specific databases

VGNCiVGNC:1670 TDRD5

Subcellular locationi

PTM / Processingi

Proteomic databases

PaxDbiH2Q0P6

Expressioni

Gene expression databases

BgeeiENSPTRG00000001732

Interactioni

Protein-protein interaction databases

STRINGi9598.ENSPTRP00000002888

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 80HTH OST-typeInterPro annotationAdd BLAST74
Domaini127 – 202HTH OST-typeInterPro annotationAdd BLAST76
Domaini295 – 369HTH OST-typeInterPro annotationAdd BLAST75
Domaini525 – 584TudorInterPro annotationAdd BLAST60

Phylogenomic databases

eggNOGiKOG2039 Eukaryota
ENOG4111HJ1 LUCA
GeneTreeiENSGT00730000110295
InParanoidiH2Q0P6
OMAiQKLYIPR
OrthoDBiEOG091G00Z5
TreeFamiTF342664

Family and domain databases

CDDicd09975 LOTUS_2_TDRD5, 1 hit
Gene3Di2.40.50.90, 2 hits
InterProiView protein in InterPro
IPR025605 OST-HTH/LOTUS_dom
IPR035437 SNase_OB-fold_sf
IPR037982 TDRD5_LOTUS_2
IPR002999 Tudor
PfamiView protein in Pfam
PF12872 OST-HTH, 3 hits
PF00567 TUDOR, 1 hit
SMARTiView protein in SMART
SM00333 TUDOR, 1 hit
PROSITEiView protein in PROSITE
PS51644 HTH_OST, 3 hits
PS50304 TUDOR, 1 hit

Sequencei

Sequence statusi: Complete.

H2Q0P6-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEQERIQEC LRKEIRSLLI STKDGLSPQE LEKEYLLMVG KHLPLRILGY
60 70 80 90 100
RSTMELVLDM PDVVSVCPGA GGTVILKAIP DESTKGIASL VAKQRSSHKV
110 120 130 140 150
RNSMHKGRPS IYSGPRSHRR VPYRGRVAPI LPAVVKSELK DLLALSPVLL
160 170 180 190 200
SDFEKAFAKR FGRSFQYMQY GFLSMFEVLN AASDVISVEQ TRAGSLLMLK
210 220 230 240 250
KSVTEEKPRG RPAGKIFTQP FRMKQGSYST GFPVAKPCFS QPTSNMKPPK
260 270 280 290 300
QIMSMEKTSK LNVVETSRLN HTEKLNQLEN TFKSVIAQIG PGGTISSELK
310 320 330 340 350
HKIKFVVSKF PEGLFISKLL GEYEVIFKEQ LSPKKLGFLN VTELVGALSD
360 370 380 390 400
ILHVEFREGQ QDLLVFDADK KPLPPVQSGK KIEAKACVSS PPRNSLSTAA
410 420 430 440 450
VKETVWNCPS KKQKEPQQKI CKKPNLVVKP LQLQVETNKS ELNLAMANHD
460 470 480 490 500
IPPDAVPDKK LCRLPPLDTS SLIGVFVEYI ISPSQFYIRI YSRDSSELLE
510 520 530 540 550
DMMIEMRRCY SNQLVSDRYV MPECFIQPGH LCCVRISEDK WWYRVIIHRV
560 570 580 590 600
LEKQEVEVFY PDFGNIGIVQ KSSLRFLKCC YTKLPAQAIP CSLAWVRPVE
610 620 630 640 650
EHWTSKAILQ FQKLCGLKPL VGVVDEYVDG ILNIFLCDTS SNEDVYFHHV
660 670 680 690 700
LRTEGHAIVC RENISSKGFS ELNPLALYTT SSGGPEDIVL TELGYPSQQH
710 720 730 740 750
YFNEDRKISP QSKESELHIL QDINDEKSLS HLKSESKEPL KDSEFESLKT
760 770 780 790 800
CNKSFEEDPK WSNPEPNDLK EENEDEIPTG MPCLESVTIG DDIWDENWLP
810 820 830 840 850
LQAKMGKGGD AASHLFTASL GGKNQYSSCK EMPQKDWCFS TPKDTWDDSW
860 870 880 890 900
QPSGLVNGTK VEVHKPEVLG AQEKNTGTNR TQKQLDINGS SDSSTLPKLE
910 920 930 940 950
EFCTSLTQSE QSADGSQSEP NNSQTQPKQI QLSTAAPCST TAVDDSAEKP
960 970 980 990 1000
SGSVESSPEI LKNEDFSSSR AITLYKDKRQ ESVDQLSLIL SYECQISQKL
1010 1020 1030
YIPRSTATAA LGAAARLATS RSLLHWYPSV KRMEA
Length:1,035
Mass (Da):115,942
Last modified:March 21, 2012 - v1
Checksum:i3A6D1EFE82D94093
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AACZ04056196 Genomic DNA No translation available.
AACZ04056197 Genomic DNA No translation available.
AACZ04056198 Genomic DNA No translation available.
NBAG03000235 Genomic DNA Translation: PNI67481.1
RefSeqiXP_009437392.1, XM_009439117.2
XP_514031.3, XM_514031.4

Genome annotation databases

EnsembliENSPTRT00000003140; ENSPTRP00000002888; ENSPTRG00000001732
GeneIDi457554

Similar proteinsi

Entry informationi

Entry nameiH2Q0P6_PANTR
AccessioniPrimary (citable) accession number: H2Q0P6
Secondary accession number(s): A0A2J8N6T8
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: May 23, 2018
This is version 30 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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