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Protein
Submitted name:

RNA polymerase B subunit II

Gene

rpb2

Organism
Ochroconis anomala
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
RNA polymerase B subunit IIImported
Gene namesi
Name:rpb2Imported
OrganismiOchroconis anomalaImported
Taxonomic identifieri1070149 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaPezizomycotinaDothideomycetesDothideomycetes incertae sedisVenturialesSympoventuriaceaeOchroconis

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini45 – 109RNA_pol_Rpb2_3InterPro annotationAdd BLAST65
Domaini144 – 206RNA_pol_Rpb2_4InterPro annotationAdd BLAST63
Domaini253 – 324RNA_pol_Rpb2_5InterPro annotationAdd BLAST72

Sequence similaritiesi

Belongs to the RNA polymerase beta chain family.UniRule annotation

Family and domain databases

InterProiView protein in InterPro
IPR015712 DNA-dir_RNA_pol_su2
IPR007645 RNA_pol_Rpb2_3
IPR007646 RNA_pol_Rpb2_4
IPR007647 RNA_pol_Rpb2_5
PANTHERiPTHR20856 PTHR20856, 1 hit
PfamiView protein in Pfam
PF04565 RNA_pol_Rpb2_3, 1 hit
PF04566 RNA_pol_Rpb2_4, 1 hit
PF04567 RNA_pol_Rpb2_5, 1 hit

Sequencei

Sequence statusi: Fragment.

H1ZYT2-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
ETNREFNSLL AIKHHTISNG LKYALATGNW GEQKKAASSK AGVSQVLNRY
60 70 80 90 100
TFASTLSHLR RTNTPIGRDG KIAKPRQLHN THWGLVCPAE TPEGQACGLV
110 120 130 140 150
KNLSLMCYVS IGSPGEPIID YLTMRGMELL EEFDPHSAQD ATKIFVNGVW
160 170 180 190 200
VGVHRDPTRL HNNLRTIRGD PNYLIEEVSI IRDIRERELR ILTDAGRVMR
210 220 230 240 250
PLFVVEYRPE YADRKGELVL RREHLTTLAA DKDKVINPVD REEEQEMLRN
260 270 280 290 300
LGWNRLVKEK VIEYLDAEEE ETAMIAMTPD DLMELKHLQY TNQPMEKDTS
310 320 330 340
DAHARIKPKM NPSISRFTHC EIHPAMILGV CASIIPFPDH NQVS
Length:344
Mass (Da):39,148
Last modified:March 21, 2012 - v1
Checksum:i1931A26E461E0B26
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei344Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE575205 Genomic DNA Translation: CCC58649.1
HE575206 Genomic DNA Translation: CCC58650.1

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE575205 Genomic DNA Translation: CCC58649.1
HE575206 Genomic DNA Translation: CCC58650.1

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

InterProiView protein in InterPro
IPR015712 DNA-dir_RNA_pol_su2
IPR007645 RNA_pol_Rpb2_3
IPR007646 RNA_pol_Rpb2_4
IPR007647 RNA_pol_Rpb2_5
PANTHERiPTHR20856 PTHR20856, 1 hit
PfamiView protein in Pfam
PF04565 RNA_pol_Rpb2_3, 1 hit
PF04566 RNA_pol_Rpb2_4, 1 hit
PF04567 RNA_pol_Rpb2_5, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH1ZYT2_9PEZI
AccessioniPrimary (citable) accession number: H1ZYT2
Secondary accession number(s): H1ZYT3
Entry historyiIntegrated into UniProtKB/TrEMBL: March 21, 2012
Last sequence update: March 21, 2012
Last modified: March 15, 2017
This is version 15 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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