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Protein
Submitted name:

Uncharacterized protein

Gene
N/A
Organism
Taeniopygia guttata (Zebra finch) (Poephila guttata)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

GO - Molecular functioni

Enzyme and pathway databases

ReactomeiR-TGU-1442490 Collagen degradation
R-TGU-1474244 Extracellular matrix organization
R-TGU-1650814 Collagen biosynthesis and modifying enzymes
R-TGU-186797 Signaling by PDGF
R-TGU-2022090 Assembly of collagen fibrils and other multimeric structures
R-TGU-3000171 Non-integrin membrane-ECM interactions
R-TGU-3000178 ECM proteoglycans
R-TGU-419037 NCAM1 interactions
R-TGU-8948216 Collagen chain trimerization

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
OrganismiTaeniopygia guttata (Zebra finch) (Poephila guttata)Imported
Taxonomic identifieri59729 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesPasseroideaEstrildidaeEstrildinaeTaeniopygia
Proteomesi
  • UP000007754 Componenti: Unplaced

Interactioni

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000017107

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini65 – 299Fibrillar collagen NC1InterPro annotationAdd BLAST235

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00900000140789
InParanoidiH1A2J5
OMAiNEQEMER
OrthoDBiEOG091G03LV
TreeFamiTF323987

Family and domain databases

InterProiView protein in InterPro
IPR000885 Fib_collagen_C
PfamiView protein in Pfam
PF01410 COLFI, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002078 Fib_collagen_C, 1 hit
SMARTiView protein in SMART
SM00038 COLFI, 1 hit
PROSITEiView protein in PROSITE
PS51461 NC1_FIB, 1 hit

Sequencei

Sequence statusi: Complete.

H1A2J5-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
PSPHDRSSLP QGPPGNPGPP GPPGPPGTGI DMSAFAGLGQ PEKGPDPGRY
60 70 80 90 100
MRADEAAPGL RPHDAEVDAT LKALNNQIEN IRSPEGSRKN PARTCRDIKL
110 120 130 140 150
CHPDWKSGDY WIDPNQGCTL DAIKVFCNMA TGETCVYPSP GSIPRKNWWS
160 170 180 190 200
SKAKEKKHVW FAETINGGFH FSYGAEELAP NTANIQMTFL RLLSTEGSQN
210 220 230 240 250
VTYHCRNSVA YLDEESGSLR KALLIQGSND VEIRAEGNSR FTYSVLEDGC
260 270 280 290
TKHTGKWGRT VIEYRSQKTS RLPIVDIAPM DIGGPEQEFG VDLGPVCFL
Length:299
Mass (Da):32,636
Last modified:February 22, 2012 - v1
Checksum:i71784380E41B9391
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01075886 Genomic DNA No translation available.
ABQF01075887 Genomic DNA No translation available.
ABQF01075888 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSTGUT00000017479; ENSTGUP00000017107; ENSTGUG00000016818

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01075886 Genomic DNA No translation available.
ABQF01075887 Genomic DNA No translation available.
ABQF01075888 Genomic DNA No translation available.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000017107

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSTGUT00000017479; ENSTGUP00000017107; ENSTGUG00000016818

Phylogenomic databases

eggNOGiKOG3544 Eukaryota
ENOG410XNMM LUCA
GeneTreeiENSGT00900000140789
InParanoidiH1A2J5
OMAiNEQEMER
OrthoDBiEOG091G03LV
TreeFamiTF323987

Enzyme and pathway databases

ReactomeiR-TGU-1442490 Collagen degradation
R-TGU-1474244 Extracellular matrix organization
R-TGU-1650814 Collagen biosynthesis and modifying enzymes
R-TGU-186797 Signaling by PDGF
R-TGU-2022090 Assembly of collagen fibrils and other multimeric structures
R-TGU-3000171 Non-integrin membrane-ECM interactions
R-TGU-3000178 ECM proteoglycans
R-TGU-419037 NCAM1 interactions
R-TGU-8948216 Collagen chain trimerization

Family and domain databases

InterProiView protein in InterPro
IPR000885 Fib_collagen_C
PfamiView protein in Pfam
PF01410 COLFI, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD002078 Fib_collagen_C, 1 hit
SMARTiView protein in SMART
SM00038 COLFI, 1 hit
PROSITEiView protein in PROSITE
PS51461 NC1_FIB, 1 hit
ProtoNetiSearch...

Entry informationi

Entry nameiH1A2J5_TAEGU
AccessioniPrimary (citable) accession number: H1A2J5
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: June 20, 2018
This is version 46 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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