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Protein
Submitted name:

Cholinergic receptor nicotinic gamma subunit

Gene

CHRNG

Organism
Taeniopygia guttata (Zebra finch) (Poephila guttata)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionIon channel, Ligand-gated ion channelSAAS annotation, ReceptorSAAS annotation
Biological processIon transport, Transport

Names & Taxonomyi

Protein namesi
Submitted name:
Cholinergic receptor nicotinic gamma subunitImported
Gene namesi
Name:CHRNGImported
OrganismiTaeniopygia guttata (Zebra finch) (Poephila guttata)Imported
Taxonomic identifieri59729 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesPasseroideaEstrildidaeEstrildinaeTaeniopygia
Proteomesi
  • UP000007754 Componenti: Chromosome 9

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei223 – 245HelicalSequence analysisAdd BLAST23
Transmembranei257 – 277HelicalSequence analysisAdd BLAST21
Transmembranei289 – 312HelicalSequence analysisAdd BLAST24
Transmembranei454 – 476HelicalSequence analysisAdd BLAST23

Keywords - Cellular componenti

Cell junction, Cell membraneSAAS annotation, Membrane, Postsynaptic cell membraneSAAS annotation, Synapse

PTM / Processingi

Keywords - PTMi

Disulfide bondSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000010266

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini7 – 222Neur_chan_LBDInterPro annotationAdd BLAST216
Domaini229 – 471Neur_chan_membInterPro annotationAdd BLAST243

Sequence similaritiesi

Belongs to the ligand-gated ion channel (TC 1.A.9) family. [View classification]UniRule annotationSAAS annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysisSAAS annotation

Phylogenomic databases

eggNOGiKOG3645 Eukaryota
ENOG410XQGR LUCA
GeneTreeiENSGT00910000144023
InParanoidiH0ZI49
OMAiEEWFLVG
OrthoDBiEOG091G0R20
TreeFamiTF315605

Family and domain databases

Gene3Di2.70.170.10, 1 hit
InterProiView protein in InterPro
IPR006202 Neur_chan_lig-bd
IPR036734 Neur_chan_lig-bd_sf
IPR006201 Neur_channel
IPR036719 Neuro-gated_channel_TM_sf
IPR006029 Neurotrans-gated_channel_TM
IPR018000 Neurotransmitter_ion_chnl_CS
IPR002394 Nicotinic_acetylcholine_rcpt
PANTHERiPTHR18945 PTHR18945, 1 hit
PfamiView protein in Pfam
PF02931 Neur_chan_LBD, 1 hit
PF02932 Neur_chan_memb, 1 hit
PRINTSiPR00254 NICOTINICR
PR00252 NRIONCHANNEL
SUPFAMiSSF63712 SSF63712, 1 hit
SSF90112 SSF90112, 1 hit
TIGRFAMsiTIGR00860 LIC, 1 hit
PROSITEiView protein in PROSITE
PS00236 NEUROTR_ION_CHANNEL, 1 hit

Sequencei

Sequence statusi: Complete.

H0ZI49-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
VSCRNQEEKL FQDLMSNYNR QLRPARGDEI IDVSLKLTLT NLISLNEREE
60 70 80 90 100
TLTTNVWIEM QWSDYRLSWD PEKYDNIQLL RVPSTMVWLP DIVLENNIDG
110 120 130 140 150
TFEITLYTNV LVSPDGSIYW LPPAIYRSVC VIHVTYFPFD WQNCTMVFQS
160 170 180 190 200
QTYSANEINL LLTVEDGQTV EWISIDPEAF TENGEWAIKH RPARKIINSE
210 220 230 240 250
HFTPDDIQYQ QVIFYLIIQR KPLFYVINII VPCVLISAMA VLVYFLPAKA
260 270 280 290 300
GGQKCTVSIN VLLAQTVFLF LIAQKVPETS QAVPLIGKYL TFLMVVTVVI
310 320 330 340 350
VVNAVIVLNV SLRTPNTHSM SQRVRQVFLN LLPRYLGMAV PEETPGPPQA
360 370 380 390 400
IRRRSSLGLM VKADEYMLWK ARTELLFEKQ KERDGLMKTV LEKIERGLES
410 420 430 440 450
GSTQDFCQSL EEAGPEIRAC VDACNYIANA TREQNDFSSE SEEWMMVGQV
460 470 480 490
IDRVCFFIMA SLFVCGTVGI FLVAHFNQAP ALPFSGDPKQ YLPQ
Length:494
Mass (Da):56,455
Last modified:February 22, 2012 - v1
Checksum:i330F84D9C33F75BF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01023408 Genomic DNA No translation available.

Genome annotation databases

EnsembliENSTGUT00000010375; ENSTGUP00000010266; ENSTGUG00000009924

Similar proteinsi

Entry informationi

Entry nameiH0ZI49_TAEGU
AccessioniPrimary (citable) accession number: H0ZI49
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: March 28, 2018
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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