Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein
Submitted name:

SEH1 like nucleoporin

Gene

SEH1L

Organism
Taeniopygia guttata (Zebra finch) (Poephila guttata)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processProtein transportSAAS annotation, Transport

Enzyme and pathway databases

ReactomeiR-TGU-141444 Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
R-TGU-159236 Transport of Mature mRNA derived from an Intron-Containing Transcript
R-TGU-191859 snRNP Assembly
R-TGU-2500257 Resolution of Sister Chromatid Cohesion
R-TGU-3232142 SUMOylation of ubiquitinylation proteins
R-TGU-3301854 Nuclear Pore Complex (NPC) Disassembly
R-TGU-4085377 SUMOylation of SUMOylation proteins
R-TGU-4551638 SUMOylation of chromatin organization proteins
R-TGU-5578749 Transcriptional regulation by small RNAs
R-TGU-5663220 RHO GTPases Activate Formins

Names & Taxonomyi

Protein namesi
Submitted name:
SEH1 like nucleoporinImported
Gene namesi
Name:SEH1LImported
OrganismiTaeniopygia guttata (Zebra finch) (Poephila guttata)Imported
Taxonomic identifieri59729 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaePasseriformesPasseroideaEstrildidaeEstrildinaeTaeniopygia
Proteomesi
  • UP000007754 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Interactioni

Protein-protein interaction databases

STRINGi59729.ENSTGUP00000009823

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 152WD_REPEATS_REGIONInterPro annotationAdd BLAST145
Repeati8 – 40WDPROSITE-ProRule annotationAdd BLAST33
Domaini274 – 315WD_REPEATS_REGIONInterPro annotationAdd BLAST42
Repeati274 – 306WDPROSITE-ProRule annotationAdd BLAST33

Sequence similaritiesi

Belongs to the WD repeat SEC13 family.SAAS annotation

Keywords - Domaini

RepeatSAAS annotation, WD repeatPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG2445 Eukaryota
ENOG410XRNW LUCA
GeneTreeiENSGT00550000074999
InParanoidiH0ZGW0
KOiK14299
OMAiIYEAPDI
OrthoDBiEOG091G09MA
TreeFamiTF105924

Family and domain databases

Gene3Di2.130.10.10, 1 hit
InterProiView protein in InterPro
IPR020472 G-protein_beta_WD-40_rep
IPR037597 Nucleoporin_Seh1
IPR037363 Sec13/Seh1_fam
IPR015943 WD40/YVTN_repeat-like_dom_sf
IPR001680 WD40_repeat
IPR017986 WD40_repeat_dom
IPR036322 WD40_repeat_dom_sf
PANTHERiPTHR11024 PTHR11024, 1 hit
PTHR11024:SF3 PTHR11024:SF3, 1 hit
PfamiView protein in Pfam
PF00400 WD40, 2 hits
PRINTSiPR00320 GPROTEINBRPT
SMARTiView protein in SMART
SM00320 WD40, 5 hits
SUPFAMiSSF50978 SSF50978, 1 hit
PROSITEiView protein in PROSITE
PS50082 WD_REPEATS_2, 2 hits
PS50294 WD_REPEATS_REGION, 2 hits

Sequencei

Sequence statusi: Complete.

H0ZGW0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MFVARSIAAD HRDLIHDVSF DFHGRRMATC SSDQSVKVWD KSENGDWHCT
60 70 80 90 100
ASWKTHSGSV WRVTWAHPEF GQVLASCSFD RTAAVWEEIV GESNDKLRGQ
110 120 130 140 150
SHWVKRTTLV DSRTSVTDVK FAPKHMGLML ATCSADGVVR IYEAPDVMNL
160 170 180 190 200
SQWSLQHEIS CKLSCSCISW NPSSSRAHSP MIAVGSDDNS PNILAKVQIY
210 220 230 240 250
EYNENTRKYA KAEALMTVSD PVHDIAFAPN LGRSFHILAV ATKDVRIFTL
260 270 280 290 300
KPLRKELTSS GGLTKFEIHI VAQFDNHNSQ VWRVSWNITG TVLASSGDDG
310 320 330 340 350
CVRLWKANYM DNWKCTGILK GNGSPVNGSS QQGIFNASLG SANTSLQNSL
360 370 380 390 400
NGSSASRYFF PPLDSPRAGS RWSSHAQLLP PPPLIEQSCD ADTANLQYPH
410
PRRRCVSRPL NLLPENEGV
Length:419
Mass (Da):46,418
Last modified:February 22, 2012 - v1
Checksum:i0887808DC3E766A5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ABQF01004587 Genomic DNA No translation available.
RefSeqiXP_004175267.1, XM_004175219.1

Genome annotation databases

EnsembliENSTGUT00000009929; ENSTGUP00000009823; ENSTGUG00000009525
GeneIDi101233238
KEGGitgu:101233238

Similar proteinsi

Entry informationi

Entry nameiH0ZGW0_TAEGU
AccessioniPrimary (citable) accession number: H0ZGW0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 51 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.

Do not show this banner again