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Protein
Submitted name:

Small nuclear ribonucleoprotein polypeptide A', isoform CRA_a

Gene

SNRPA1

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Keywordsi

Molecular functionRibonucleoproteinImported, Viral nucleoproteinImported

Names & Taxonomyi

Protein namesi
Submitted name:
Small nuclear ribonucleoprotein polypeptide A', isoform CRA_aImported
Submitted name:
U2 small nuclear ribonucleoprotein A'Imported
Gene namesi
Name:SNRPA1Imported
ORF Names:hCG_1992004Imported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 15

Organism-specific databases

EuPathDBiHostDB:ENSG00000131876.16
HGNCiHGNC:11152 SNRPA1

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Virion

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000131876

PTM / Processingi

Proteomic databases

MaxQBiH0YKK0
PeptideAtlasiH0YKK0
PRIDEiH0YKK0

Expressioni

Gene expression databases

BgeeiENSG00000131876 Expressed in 92 organ(s), highest expression level in small intestine Peyer's patch
ExpressionAtlasiH0YKK0 baseline and differential

Structurei

3D structure databases

SMRiH0YKK0
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini128 – 146LRRcapInterPro annotationAdd BLAST19

Phylogenomic databases

eggNOGiKOG1644 Eukaryota
COG4886 LUCA
GeneTreeiENSGT00510000047131

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR003603 U2A'_phosphoprotein32A_C
SMARTiView protein in SMART
SM00446 LRRcap, 1 hit
PROSITEiView protein in PROSITE
PS51450 LRR, 4 hits

Sequence (1+)i

Sequence statusi: Complete.

This entry has 1 described isoform and 3 potential isoforms that are computationally mapped.Show allAlign All

H0YKK0-1 [UniParc]FASTAAdd to basket
« Hide
        10         20         30         40         50
MVKLTAELIE QAAQYTNAVR DRELDLRGYK IPVIENLGAT LDQFDAIDFS
60 70 80 90 100
DNEIRKLDGF PLLRRLKTLL VNNNRICRIG EGLDQALPCL TELILTNNSL
110 120 130 140 150
VELGDLDPLA SLKSLTYLSI LRNPVTNKKH YRLYVIYKVP QVRVLDFQKV

KLKF
Length:154
Mass (Da):17,673
Last modified:February 22, 2012 - v1
Checksum:i0C877D085CC1066D
GO

Computationally mapped potential isoform sequencesi

There are 3 potential isoforms mapped to this entry.BLASTAlignShow allAdd to basket
EntryEntry nameProtein names
Gene namesLengthAnnotation
P09661RU2A_HUMAN
U2 small nuclear ribonucleoprotein ...
SNRPA1
255Annotation score:
H0YMA0H0YMA0_HUMAN
U2 small nuclear ribonucleoprotein ...
SNRPA1
142Annotation score:
H0YLR3H0YLR3_HUMAN
U2 small nuclear ribonucleoprotein ...
SNRPA1
89Annotation score:

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC023024 Genomic DNA No translation available.
CH471101 Genomic DNA Translation: EAX02296.1
UniGeneiHs.528763

Genome annotation databases

EnsembliENST00000559309; ENSP00000452836; ENSG00000131876
ENST00000626000; ENSP00000486896; ENSG00000131876
UCSCiuc059nyl.1 human

Similar proteinsi

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC023024 Genomic DNA No translation available.
CH471101 Genomic DNA Translation: EAX02296.1
UniGeneiHs.528763

3D structure databases

SMRiH0YKK0
ModBaseiSearch...
MobiDBiSearch...

Proteomic databases

MaxQBiH0YKK0
PeptideAtlasiH0YKK0
PRIDEiH0YKK0

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENST00000559309; ENSP00000452836; ENSG00000131876
ENST00000626000; ENSP00000486896; ENSG00000131876
UCSCiuc059nyl.1 human

Organism-specific databases

EuPathDBiHostDB:ENSG00000131876.16
HGNCiHGNC:11152 SNRPA1
OpenTargetsiENSG00000131876
GenAtlasiSearch...

Phylogenomic databases

eggNOGiKOG1644 Eukaryota
COG4886 LUCA
GeneTreeiENSGT00510000047131

Gene expression databases

BgeeiENSG00000131876 Expressed in 92 organ(s), highest expression level in small intestine Peyer's patch
ExpressionAtlasiH0YKK0 baseline and differential

Family and domain databases

Gene3Di3.80.10.10, 1 hit
InterProiView protein in InterPro
IPR001611 Leu-rich_rpt
IPR032675 LRR_dom_sf
IPR003603 U2A'_phosphoprotein32A_C
SMARTiView protein in SMART
SM00446 LRRcap, 1 hit
PROSITEiView protein in PROSITE
PS51450 LRR, 4 hits
ProtoNetiSearch...

Entry informationi

Entry nameiH0YKK0_HUMAN
AccessioniPrimary (citable) accession number: H0YKK0
Entry historyiIntegrated into UniProtKB/TrEMBL: February 22, 2012
Last sequence update: February 22, 2012
Last modified: September 12, 2018
This is version 55 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported
UniProt is an ELIXIR core data resource
Main funding by: National Institutes of Health

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